Gene Information

Name : vraD (SPSE_2086)
Accession : YP_006016163.1
Strain : Staphylococcus pseudintermedius ED99
Genome accession: NC_017568
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2147546 - 2148307 bp
Length : 762 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
GTGTCTATTTTAAAAGTGAGTCACGTGAGTAAAATATATGGCAATAAAAAGCAATCATATGAAGCATTAAAGGATATCCA
TTTCACAGTGGAAAAAGGGGGATTTGTGGCGATTATGGGGCCTTCAGGATCGGGGAAGACAACTTTGTTAAACGTCATTA
GTTCTATCGATAATGTGACAAGAGGGACAATTGAAATTAACGGCCAAGATATTACGAGAATGTCTAATAAACAATTATCT
TACTTTAGAAAAAAAGATGTCGGATTCATTTTCCAAGATTACAATGTGTTGCATACTTTAACAGTTCGAGAAAATATTAT
GTTGCCGCTCTCGATTACGAAACTCAGTCGTCAAGAAGCGGAAATGCGTTATCAAGAAGTGACAGAGGCGTTAGGGATTA
CTGAAATCGGAAGCAAATATCCTGACGAGATTTCGGGAGGACAAAAACAACGTACCGCAGCAGCCCGTGCATTAATAAGT
AAACCCGCGATTGTATTTGCAGACGAACCAACTGGTGCACTCGACTCTAAAAGCGCACAAGACTTATTGAAACGTTTAGA
AACGATTAACCAACAAATGAAAACGACAATTGTCATGGTAACACATGATCCAGTTGCGGCAAGTTATGCGAATCGTGTCA
TTATGTTAAAAGATGGTCAAATTCATACGGAGTTATTCCAAGGCGATCAACCTGTTTCACAATTTTATCAAGAAATCATT
CACAACCAGAGCGTATTGGGCGGTGTGAAACATGCGTTTTAG

Protein sequence : 
MSILKVSHVSKIYGNKKQSYEALKDIHFTVEKGGFVAIMGPSGSGKTTLLNVISSIDNVTRGTIEINGQDITRMSNKQLS
YFRKKDVGFIFQDYNVLHTLTVRENIMLPLSITKLSRQEAEMRYQEVTEALGITEIGSKYPDEISGGQKQRTAAARALIS
KPAIVFADEPTGALDSKSAQDLLKRLETINQQMKTTIVMVTHDPVAASYANRVIMLKDGQIHTELFQGDQPVSQFYQEII
HNQSVLGGVKHAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-38 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vraD YP_006016163.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 6e-41 43
vraD YP_006016163.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 4e-39 41