Gene Information

Name : SPSE_2021 (SPSE_2021)
Accession : YP_006016101.1
Strain : Staphylococcus pseudintermedius ED99
Genome accession: NC_017568
Putative virulence/resistance : Unknown
Product : glycine betaine/carnitine/choline transport ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2086036 - 2086995 bp
Length : 960 bp
Strand : -
Note : identified by match to protein family HMM PF00005

DNA sequence : 
ATGATAAAATTTAGCAATGTTTCTAAGTACTATGATGACCGAGTCGTTGTCAATCAAGTGGATATTGAGATTAACGAAGG
TGAATTTTTCGTTTTGATTGGTCCATCTGGCTCAGGTAAAACAACCACAATGAAAATGATTAACCGATTAATACCATTAT
CTGAAGGTTATATTTACTTTAAAGACCGTCCAATTAGTGATTATTCTGTATACGAAATGCGCTGGGATATGGGGTATGTG
TTACAACAAATCGCCTTATTTCCACATATGACTATCCGTGATAACATCGCACAAGTACCGCTGATGAAAGGCTGGACAAA
AGAAAAGATTGATGCACGCGTCGATGAACTATTATCGATGGTTGGGCTCGATCCAGAACAGTTTAGAGACCGAAAACCTG
AAGAACTCTCAGGTGGGCAACGACAACGTGTCGGAGTTGTCCGTGCGCTCGCAGTAGATCCACCGGTAATATTAATGGAC
GAACCTTTTAGTGCGTTAGATCCAATTACCCGAGAGAAACTACAAGATGACTTATTAAAGTTACAAGATCAAATTAAGAA
AACAATTGTATTCGTGACACATGATATAGAAGAAGCTTTTAAATTAGGAGATCGCATTTGCTTACTGAATCATGGGCACA
TAGAACAAATCGGCACACCTAACGATTTTATCAAAAAACCAAAAAATGATTTCGTTTGCCAATTTCTAGGTGACTTGACG
AGTGTTGTACTGAATCATTTCTCACTCGGTAAAGTTGTAGAACTTGCAGGCGAAAAAGCGACAGAGGCACAATTGCGTCA
ATATCCAGTCGTCCATGCAGATCAAACAGTGAGTGATGTTTATGATGAACTGGTACAGTATGAAGCGGTCATTGTGCCAG
TTGAAGGTGAGCAGTGGTCTTTATCGCGCCAAGACATCTTTAGCTTCTTATCAAAAAATCAGGCAGGTGTCAGTAGATGA

Protein sequence : 
MIKFSNVSKYYDDRVVVNQVDIEINEGEFFVLIGPSGSGKTTTMKMINRLIPLSEGYIYFKDRPISDYSVYEMRWDMGYV
LQQIALFPHMTIRDNIAQVPLMKGWTKEKIDARVDELLSMVGLDPEQFRDRKPEELSGGQRQRVGVVRALAVDPPVILMD
EPFSALDPITREKLQDDLLKLQDQIKKTIVFVTHDIEEAFKLGDRICLLNHGHIEQIGTPNDFIKKPKNDFVCQFLGDLT
SVVLNHFSLGKVVELAGEKATEAQLRQYPVVHADQTVSDVYDELVQYEAVIVPVEGEQWSLSRQDIFSFLSKNQAGVSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 7e-41 47
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-41 47