|
Name : SPSE_0196 (SPSE_0196) Accession : YP_006014382.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Virulence Product : PTS system ascorbate-specific transporter subunit IIC Function : - COG functional category : - COG ID : - EC number : - Position : 229176 - 230537 bp Length : 1362 bp Strand : + Note : identified by match to protein family HMM PF04215 DNA sequence : ATGCAAACGATACTTGATTTAATAGTTGATGTACTGAGCCAGCCTGCGATACTTGTTGCTTTAATTGCATTCATCGGCTT AGTTGTACAGAAAAAGCCAGTGTCAGTAGTGACATCCGGAACAATTAAAACGATTCTAGGTTTTTTAGTATTAAGTGCTG GCGCCGGTGTGGTTGTGCAATCATTAGAACCATTCGGAAAGATTTTCCAACATGCATTCGGAGTCCAAGGGGTCGTTCCA AACAATGAAGCGATTATTTCGATAGCTTTAGAAAAATATGGGACAACTGCAGCACTCATTATGGTATTTGGCATGTTAGT GAACATTTTAATTGCGCGCGTATCGAATTTGAAGTTTATTTTCTTAACTGGGCATCATACGTTTTATATGGCCGCATTTT TAGCCATTATTTTAACGGTAGGGCATATTAAAGGTGTGTTAACGGTTATATTAGGTGCATTAATTTTAGGATTGATTATG GCTGTATTTCCAGCATTAGCACAACCGACGATGCGTAAAATCACTGGTAATGATCAAGTCGCATTAGGCCATTTTGGGAC AGTGAGTTATTGGGCAGCAGGTGAAGTAGGAAAATTATTTAAAGGCCATTCTAAATCGACGGAAGAGATTAACTTTCCCA AAGGTTTGAGCTTTTTACGAGAAAGTACGATTAGTATTTCGTTAACAATGATTTTGCTGTATCTCATTGCGAGTTTATTT GCTGGTGTCGGTTATGTACACGATGAAATTAGTAAAGATCAAAACTTTATCGTTTTTTCACTCATTCAAGGGGTTACATT CGCGGCAGGGGTGTTTATCATTTTAACGGGCGTCCGCTTGATTTTGGCCGAAATTGTACCTGCATTTAAAGGTATTTCAG AAAAGTTGGTTCCGCATTCGAAGCCAGCATTAGATTGTCCGATTGTATTCCCTTATGCGCAAAATGCAGTATTGATTGGG TTTTTCGTTAGCTTTTTAACAGGTGTACTTGGTATGTTTGTGATGTTTTTAATTGGTGGTGTAGTGATTTTACCGGGTGT TGTCCCACACTTCTTCTTAGGTGCGACTTCAGGTGTGTTTGGTAATGCACGCGGTGGCATTAAAGGGGCTGTTGCAGGGT CAGCATTAAATGGTCTACTGATCACGTTTTTACCTTTACTCTTCTTACCGTTTTTAGGAGATTTAGGACTCGCTTCAACG ACCTTCTCAGATACTGACTTTTTAGTTGTTGGCATTGTATTTGGTAATATCGTCAAATATTTAGGCATTGTGGGTCTGGT CATAGGTATTATCATTGTAGCTGCCGTCGCGATTGTATTACAAAAGCGCGGTCGTACAGTTTCAGAAGCGACAAAGTCTT AA Protein sequence : MQTILDLIVDVLSQPAILVALIAFIGLVVQKKPVSVVTSGTIKTILGFLVLSAGAGVVVQSLEPFGKIFQHAFGVQGVVP NNEAIISIALEKYGTTAALIMVFGMLVNILIARVSNLKFIFLTGHHTFYMAAFLAIILTVGHIKGVLTVILGALILGLIM AVFPALAQPTMRKITGNDQVALGHFGTVSYWAAGEVGKLFKGHSKSTEEINFPKGLSFLRESTISISLTMILLYLIASLF AGVGYVHDEISKDQNFIVFSLIQGVTFAAGVFIILTGVRLILAEIVPAFKGISEKLVPHSKPALDCPIVFPYAQNAVLIG FFVSFLTGVLGMFVMFLIGGVVILPGVVPHFFLGATSGVFGNARGGIKGAVAGSALNGLLITFLPLLFLPFLGDLGLAST TFSDTDFLVVGIVFGNIVKYLGIVGLVIGIIIVAAVAIVLQKRGRTVSEATKS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF8 | AAK27335.1 | unknown | Not tested | PAI-I AL862 | Protein | 3e-93 | 57 |
| unnamed | CAC39291.1 | hypothetical protein | Not tested | LPA | Protein | 2e-93 | 57 |
| vpeC | ADD91725.1 | putative PTS system-specific IIC component VpeC | Virulence | PAI-I AL862 | Protein | 2e-93 | 57 |
