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Name : SPSE_1791 (SPSE_1791) Accession : YP_006015881.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Unknown Product : transposase for insertion sequence element IS1182 Function : - COG functional category : - COG ID : - EC number : - Position : 1839017 - 1840621 bp Length : 1605 bp Strand : + Note : identified by match to protein family HMM PF01609 DNA sequence : ATGTATCAAAATTATACCATAAACCAACTTTGTTTGCCTATAGATCTTGAAATTAAATTAGAAGAAAATGATTTTGCTCA TGCCATTGTGCAGTTTGTTGACTCTATTCCCGATGAAGTCTTTCTTCCTTATTATCAATCTATGGGTAGACCCCAATATC ATCCTCGTATGCTACTTTCCATTATTCTTTGTGCCTATATTCAAGGGGTTTATTCGGGCCGCCAAATACAAAATATGCTG ATAGATAGTATTCGGATGCGCTACTTATCTCAAGAGCAATTCCCTAACTTTCGTACTATTAATCGTTTTCGCGTTCATCC GATTATGAACGATATTCTAGATCATTCATTTGTTCAATTTCGTGAGCTACTGGTTCAAAGTGGCTTAATCAGTGGCAGTG CTCTATACATTGATGGTACAAAAATTGAAGCGGATGCGAATAAATACTCTTTCGTTTGGAAAAAAAGTATTTTAAAGTAT AAGGATAGCCTTGATCAAAAAGCCCTTGAAAACTACCAACAAATGGTGGAAACAAAAATCTTACCTGAGTTAATAGATGA TTTAAAGGATGAACTTTCTATAGAAGAGATTGAAAGGATTCGTCAATCTTTGGAAGAAAAGGAAAATCAATTAATTGAAG CGATTGACCAAACCGAAACAGTAGAAGAACGAAAATTACTTCGTAAAGAAAAATCTGAAGTTCATAAGCAGAAGAAGCGA TTCGATGATTTTGCCCAAAGAAAAATGAGCTACGAAGAACAATTAGTGATTATGGGTGTACGCAATAGTTTCTCAAAGAC GGATCATGACGCTACTTTTATGCGAATGAAAGAAGATCACATGCTTAATGGCCAACTAAAACCAGGTTATAATATTCAAC TTGCGACAGAAAATCAATTTGCTCTTGCTTATGATTGTTATCCAAATCCAACAGATACACGAACATTTATCCCATTTCTT GAAAAGATTGAATCAAAAATAGGTTTACCAGAAAATATTGTCGCAGATGCCGGTTATGCAAGTGAAGAAAATTATTGTTA TGTGTTAGACGAAACAGAATCCACCCCCATCATTCCGCATCAAGGTTACTTAAAAGAGAAGAAACGCGCCCATAAACAAA ATCAGTTTCATCGAGATAATTGGACTTACAACGAGTTGGATGATTACTATATTTGTCCCAATCAGAAAAGAGTAGTGTTC TCACATTATTCACAACGTAAAGATAGAAATGGATTTATTCGAAACTTCAAAATCTATGAATGTGAAGATTGTACAGGATG TCCATTGAGAGAGAAATGTACCAAAGCAAAAGAAGGAAAAAATCGACGTTTGAATATTAATCCAACCTGGGAATATATAA AAATAAAAGCGAATGAAAAGATAGAAAGCAAAGAAACAGCCTCATACTATGCGCAGCGAAAGATAGATGTCGAAACAGTT TTTGGAAACATTAAACAAAATATGAAATTTAAAAGATTCCATGTCCGAGGAGCTGAAAAAATTTTTAAGGAAATGGGACT TGTATTTCTTGCGCACAATTTTAGGAAATTAGTAACTAGAGTAAGGAAATATGAGGGAAAAACAATCATACAAAACCAAA TATAG Protein sequence : MYQNYTINQLCLPIDLEIKLEENDFAHAIVQFVDSIPDEVFLPYYQSMGRPQYHPRMLLSIILCAYIQGVYSGRQIQNML IDSIRMRYLSQEQFPNFRTINRFRVHPIMNDILDHSFVQFRELLVQSGLISGSALYIDGTKIEADANKYSFVWKKSILKY KDSLDQKALENYQQMVETKILPELIDDLKDELSIEEIERIRQSLEEKENQLIEAIDQTETVEERKLLRKEKSEVHKQKKR FDDFAQRKMSYEEQLVIMGVRNSFSKTDHDATFMRMKEDHMLNGQLKPGYNIQLATENQFALAYDCYPNPTDTRTFIPFL EKIESKIGLPENIVADAGYASEENYCYVLDETESTPIIPHQGYLKEKKRAHKQNQFHRDNWTYNELDDYYICPNQKRVVF SHYSQRKDRNGFIRNFKIYECEDCTGCPLREKCTKAKEGKNRRLNINPTWEYIKIKANEKIESKETASYYAQRKIDVETV FGNIKQNMKFKRFHVRGAEKIFKEMGLVFLAHNFRKLVTRVRKYEGKTIIQNQI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | BAC67565.1 | hypothetical protein | Not tested | Type-IVc SCCmec | Protein | 5e-87 | 48 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 3e-103 | 48 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 2e-101 | 48 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 4e-103 | 48 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 4e-103 | 48 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 4e-103 | 48 |
| tnp | YP_254534.1 | IS1272 transposase | Not tested | ¥ðSh2 | Protein | 1e-98 | 47 |
| SE0076 | NP_763631.1 | transposase | Not tested | SCCpbp4 | Protein | 9e-108 | 44 |
