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Name : pdhD (SPSE_1695) Accession : YP_006015789.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Unknown Product : pyruvate dehydrogenase complex E3 component, lipoamide dehydrogenase Function : - COG functional category : - COG ID : - EC number : 1.8.1.4 Position : 1734891 - 1736297 bp Length : 1407 bp Strand : - Note : identified by match to protein family HMM PF00070, match to protein family HMM PF01134, match to protein family HMM PF02852, match to protein family HMM PF07992, match to protein family HMM TIGR01350 DNA sequence : ATGGTAGTCGGAGATTTTCCAATTGAAACAGATACTATTGTCATTGGGGCAGGTCCTGGTGGCTATGTTGCAGCAATCCG TGCAGCACAGTTAGGTCAAAAAGTAACGATCGTTGAAAAAGGCAATTTAGGTGGCGTATGCTTAAACGTAGGTTGTATTC CTTCAAAAGCATTGTTAAACGTATCTCACCGTTTCGAACAAGCGCAACATGGTGCGGACTTAGGTATCACAGCTGAGAAT GTATCTTTAGATTTCGATAAAGTACAATCTTTTAAAGGTTCAGTTGTTAGCAAATTAACTGGCGGTGTTGAATCATTATT AAAAGGAAACAAAGTTGAAATCGTTCGCGGTGAAGCTTACTTCGTTGATGAACACAGCTTACGTGTAATGGACGATAAGA GCGCACAAACTTACAACTTCAAAAATGCTATCGTAGCAACAGGTTCACGTCCAATTCAAATTCCTAACTTCGAATTTGGT GGTCGTATCCTTGACTCTACTGGTGCGTTAAACTTACAAGAAGTGCCTAAAAAATTAGTTGTCGTTGGTGGCGGCTACAT CGGTTCAGAATTAGGTACTGCCTATGCTAACTTCGGTACTGAAGTGACAATTCTTGAAGGTGCAAAAGAAATCCTTGGTG GTTTCGAAAAACAAATGGTTGCACCAGTTAAAAAAGAAATGAAAGCAAAAGGCATGATCATCGAAACAGAAGCTTTAGCT AAATCAGCTGAAGAAACTGATAATGGTGTTAAAGTGACTTACGAAGTTAAAGGTGAAGAAAAAACAATCGAAGCTGACTA CGTATTAGTAACTGTAGGTCGTCGTCCAAACACTGACGAACTTGGTTTAGAAGAAGTTGGCGTGAAATTAACTGACCGCG GTTTAGTTGAAGTTGACAAACAAAGCCGTACATCTGTTGACAGTATCTATGCAATTGGTGATATCGTTCCAGGCTTACCA CTCGCACACAAAGCAAGCTACGAAGCTAAAGTAGCAGCTGAAGCGATTGCAGGACAAAATTCAGAAGTGGATTACATCGG TATGCCTGCAGTATGTTTCACTGAGCCAGAATTAGCACAAGTAGGTTATACTGAAGCACAAGCGAAAGAAGAAGGTCTTG ATATCAAAGCTTCTAAATTCCCTTACCAAGCAAACGGCCGTGCATTATCATTAAATGATACAAACGGTTTCGTTAAACTT GTGACGCTTAAAGAAGATGACACGCTTATTGGTGCACAAGTTGTGGGTACAAACGCTTCAGACGTTATCGCTGAACTTGG TTTAGCAATTGAAGCGGGTATGAATGCTGAAGATATCGCTTTAACAGTTCATGCTCACCCAACATTAGGTGAAATGAGCA TGGAAGCTGCTGAAAAAGCTTTAGGTTTACCAATTCACACAATGTAA Protein sequence : MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLNVSHRFEQAQHGADLGITAEN VSLDFDKVQSFKGSVVSKLTGGVESLLKGNKVEIVRGEAYFVDEHSLRVMDDKSAQTYNFKNAIVATGSRPIQIPNFEFG GRILDSTGALNLQEVPKKLVVVGGGYIGSELGTAYANFGTEVTILEGAKEILGGFEKQMVAPVKKEMKAKGMIIETEALA KSAEETDNGVKVTYEVKGEEKTIEADYVLVTVGRRPNTDELGLEEVGVKLTDRGLVEVDKQSRTSVDSIYAIGDIVPGLP LAHKASYEAKVAAEAIAGQNSEVDYIGMPAVCFTEPELAQVGYTEAQAKEEGLDIKASKFPYQANGRALSLNDTNGFVKL VTLKEDDTLIGAQVVGTNASDVIAELGLAIEAGMNAEDIALTVHAHPTLGEMSMEAAEKALGLPIHTM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 1e-110 | 51 |
