|
Name : cadA (SPSE_1488) Accession : YP_006015586.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Resistance Product : cadmium-translocating P-type ATPase Function : - COG functional category : - COG ID : - EC number : 3.6.3.3 Position : 1517182 - 1519356 bp Length : 2175 bp Strand : - Note : identified by match to protein family HMM PF00122, match to protein family HMM PF00403, match to protein family HMM PF00702, match to protein family HMM TIGR01494, match to protein family HMM TIGR01512, match to protein family HMM TIGR01525 DNA sequence : ATGATTCAAAGTCGTAAAACTTACAGAATAGAAGGTTTATCATGCGCCAATTGTGCTGGGAAATTTGAAAGAAATGTCCG GGGTCTTGCGTCAGTTGAAGAGGCACAAGTCAATTTTGGTGCTTCGAAAATTTATGTAACGGGCGACCCAACTGTAGAAG AATTAGAAGGGGCGGGCGCATTTGAAAATTTAAAATTGACATTAGATGAGCGGAAAAAGATTAGTGCGAACGCTGACCGA AGCACAATGGCGCAACCGACCTCTTGGTTTGATAAGGTCAAACAGTTTTATAAAGCGCATCAATCTATATGTGTAGCGAC GTTGTTCATGCTACTTGGTTACATTTCACATTTGATGAGCGGCGAAAACCATTTGATGACAATTTTACTATTCGCTTGTT CGATATTATTAAGTGGAAGCGCGCTACTCATCCGTGGTGTTAAAAATTTAGTGCATGTTGAATTTGATATGCATACATTG ATGACGATTGCGGTTATCGGTGGTGCAATCATTGGTCAATGGGGAGAAGTTGCAGTGGTCGTCATTTTATTTGCGATGAG TGAGGCACTTGAAACGTTTTCTATGGATAAAGCACGTCAGTCGATGCAATTTTTAATGGATATCGCGCCAGATGAAGCGA CAGTTTTAAGGGACGGTCAACATGTAAAGGTACCTGTGGATGACATTGTAATCGGTGAAAAGTTATATATTAAACCGGGA CAAAAAATTGCGTTAGACGGTGTTGTCGTTGAGGGCCGTGCTGCAGTGAATCAGGCCGCGATTACTGGTGAGTCGATGCC GGTTGAAAAAGTGGGAGGTGCAGAAGTTTTTGCTGGGACATTGAATGAAGATGGCATCCTTGAAGTGCGTGTCACGAAAA CAGCAGCACATACGACATTAGCGAAAATGATTCAACTCGTTGAAGAAGCACAATTAAATCAAACACCAGCACAAGCATTC ATTGAAAAGTTTGCGCGTTATTATACTCCTGCCATTATGGTTATCGCGTTACTCGTTGCGATAGTGCCGCCAGTAGTGTT ACATCAATCGTTTTTAACATGGGTTTATCAAGGTTTGGCCGTGCTTGTTGTCGGCTGCCCTTGTGCGTTAGTCATTGCAA CTCCAATTTCTATCGTATCAAGTATTGGTAATGCAGCAAAAAATGGTGTGCTCATTAAAGGGGGCATCCACCTAGAACAA ATCAGTCGTGTTCGTGCGTTAGCTTTTGATAAAACAGGGACACTGACGAAGGGGCACCCTGAAGTGACCACTGTTCTGCC ATTAACAGAGATGCGTGATGACACCGAGCTGATTGGTCAAATTGCAGCTATCGAAAGTCGTTCGGATCATCCGTTAGCAC GGGCAATTGTTCGTTATGCCGAAACAAAGCATCACCATTTTGATTCATATGATGTGACAGATTTTCATTCACAAACAGGC CAAGGGGTGAGGGCGAACGTTGAAGGGCGTCAATTCATCATTGGACAACCGCAAATGTTTAAAATGGCGCAATCGACGAT GAAAACGCAAATTCAACAATTACAAGAGCAAGGAAATACAGTCATTATCGTGTCAGTGGATGATGTGTTACGTCTATTAA TTGCAGTGCGAGATGAAGTGCGTGAACAGTCTCAAAAAGCGATACAGACGCTTCATGAGCTTGGCATTCAACATACCGTT ATGTTGACAGGAGACAATGAGAAAACAGCACGAGCAATTGCGCAAACACTTCACATGTCAGATGTTAAAGCAGATTTGAT GCCTGTTGATAAATTAAATGAAATTGAACAGCTTAAACAGCAATATGGGACAGTTGCGATGGTCGGTGACGGGGTGAATG ACGCACCAGCACTGGCGAGCGCATCAGTGGGTATTGCGATGGGGGGTGCGAGTACAGATACCGCACTTGAAACTGCGGAC ATTGCACTCCTTAGTGACGATATGTCGAAGTTACCTTTTACATATCGTTTGAGTCAAAAAACAATGCGTATGATTAAGGC AAATATTACGTTTGCAATTGCGATTAAATTATTAGCGTTGTTACTTGTGATTCCAGGTTGGTTAACGTTGTGGATTGCGG TATTTTCTGATATGGGTGCAACATTGATTGTCGCTTTAAATGCAATTCGTCTCCTGTATGTTAAAGCAGATAATACTGAG GTGACGACAGAGTAA Protein sequence : MIQSRKTYRIEGLSCANCAGKFERNVRGLASVEEAQVNFGASKIYVTGDPTVEELEGAGAFENLKLTLDERKKISANADR STMAQPTSWFDKVKQFYKAHQSICVATLFMLLGYISHLMSGENHLMTILLFACSILLSGSALLIRGVKNLVHVEFDMHTL MTIAVIGGAIIGQWGEVAVVVILFAMSEALETFSMDKARQSMQFLMDIAPDEATVLRDGQHVKVPVDDIVIGEKLYIKPG QKIALDGVVVEGRAAVNQAAITGESMPVEKVGGAEVFAGTLNEDGILEVRVTKTAAHTTLAKMIQLVEEAQLNQTPAQAF IEKFARYYTPAIMVIALLVAIVPPVVLHQSFLTWVYQGLAVLVVGCPCALVIATPISIVSSIGNAAKNGVLIKGGIHLEQ ISRVRALAFDKTGTLTKGHPEVTTVLPLTEMRDDTELIGQIAAIESRSDHPLARAIVRYAETKHHHFDSYDVTDFHSQTG QGVRANVEGRQFIIGQPQMFKMAQSTMKTQIQQLQEQGNTVIIVSVDDVLRLLIAVRDEVREQSQKAIQTLHELGIQHTV MLTGDNEKTARAIAQTLHMSDVKADLMPVDKLNEIEQLKQQYGTVAMVGDGVNDAPALASASVGIAMGGASTDTALETAD IALLSDDMSKLPFTYRLSQKTMRMIKANITFAIAIKLLALLLVIPGWLTLWIAVFSDMGATLIVALNAIRLLYVKADNTE VTTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0075 | NP_763630.1 | cadmium resistance protein B | Not tested | SCCpbp4 | Protein | 0.0 | 58 |
| unnamed | BAB47609.1 | cadmium resistance protein B | Not tested | Type-III SCCmec | Protein | 0.0 | 58 |
| cadA | BAC57487.1 | Probable cadmium-transporting ATPase (Cadmium efflux ATPase) | Not tested | Type-IIIinv SCCmec | Protein | 0.0 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cadA | YP_006015586.1 | cadmium-translocating P-type ATPase | BAC0298 | Protein | 1e-108 | 45 |
| cadA | YP_006015586.1 | cadmium-translocating P-type ATPase | BAC0092 | Protein | 2e-94 | 42 |
