Gene Information

Name : SPSE_1457 (SPSE_1457)
Accession : YP_006015556.1
Strain : Staphylococcus pseudintermedius ED99
Genome accession: NC_017568
Putative virulence/resistance : Unknown
Product : glycerophosphoryl diester phosphodiesterase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1485486 - 1486232 bp
Length : 747 bp
Strand : -
Note : identified by match to protein family HMM PF03009

DNA sequence :
ATGACAATAATTTTTGCACACAGAGGTTTGTCGAGTAAGGCACCAGAAAATACAGTGACAGCATTTGATTTGGCTCGAAA
AGTAGAAGGCGTGAAATGGCTCGAGTTGGATGTAGCGATTACGAAAGATGAGCAGTTAATCATTTTTCACGATGACGATT
TAGATCGCACAACGGACACGACAGGAGAAGTAAGTGAAACGTTATATGAAAAAATTGAACACGCTTCATCTGGAGAATGG
TTCGGTCCTGAGTTCAAAGAAGAGCGTGTGTTGACGTTTGAACAGCTTATTGACTTTGCGAATCGCTATCAACTGAATTT
GAACATTGAACTTAAAGGGGTTACAGGCCCAAATGGGTCGTATCTTAGTGAGCGCATGATTCAATTGTTTAAAGAACAGA
TTAAACAATTGGATTCGAACATCGAAGTACTTATCTCAAGTTTCAACTTTGCGTTACTTAAACTAGCAGAACAACATGTG
CCACAGTATACGAGGGCGGTGTTATTTGAACGCTGTGCTTTTTATCCAGATTGGTGTACCATTGTTGATTTTTGTGGTTC
TTCCATCGTTCATTTGGAGGATATCAATTTAACGCGTGATGTCGTACAAGATATTAAATCATCTGGTTACACTTTAAATG
TGTGGACAGTTAATGATAAAGATCGTGCGAATACACTGTTCAATTGGGGCGTAGATGGCATTTTTACGGACTGTGCAGAC
GATTTAATACATTTACAAAAAGCATAG

Protein sequence :
MTIIFAHRGLSSKAPENTVTAFDLARKVEGVKWLELDVAITKDEQLIIFHDDDLDRTTDTTGEVSETLYEKIEHASSGEW
FGPEFKEERVLTFEQLIDFANRYQLNLNIELKGVTGPNGSYLSERMIQLFKEQIKQLDSNIEVLISSFNFALLKLAEQHV
PQYTRAVLFERCAFYPDWCTIVDFCGSSIVHLEDINLTRDVVQDIKSSGYTLNVWTVNDKDRANTLFNWGVDGIFTDCAD
DLIHLQKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAB72116.1 hypothetical protein Not tested Type-IVa SCCmec Protein 9e-64 57
SA0036 NP_373276.2 hypothetical protein Not tested Type-II SCCmec Protein 1e-63 57
unnamed BAB72135.1 hypothetical protein Not tested Type-IVb SCCmec Protein 9e-64 57
SAPIG0040 YP_005732850.1 glycerophosphoryl diester phosphodiesterase Not tested Type-V SCCmec Protein 1e-63 57
unnamed BAC67569.1 hypothetical protein Not tested Type-IVc SCCmec Protein 9e-64 57
SAUSA300_0030 YP_492750.1 putative glycerophosphoryl diester phosphodiesterase Not tested Type-IV SCCmec Protein 1e-63 57
unnamed BAA82224.2 glycerophosphoryldiester phosphodiesterase Not tested Type-II SCCmec Protein 9e-64 57
SERP2523 YP_190064.1 glycerophosphoryl diester phosphodiesterase UgpQ Not tested Type-II SCCmec Protein 1e-63 57
SACOL0031 YP_184942.1 glycerophosphoryl diester phosphodiesterase Not tested Type-I SCCmec Protein 1e-63 57
unnamed BAD24824.1 glycerophophory diester phosphodiesterase homolog Not tested Type-V SCCmec Protein 9e-64 57
SH0089 YP_252004.1 hypothetical protein Not tested SCCmec Protein 1e-63 57
ugpQ YP_039513.1 glycerophosphoryl diester phosphodiesterase Not tested Type-II SCCmec Protein 1e-63 57
unnamed ACL99836.1 glycerophosphoryl diester phosphodiesterase- like protein Not tested Type-V SCCmec Protein 9e-64 57
ugpQ BAA86651.1 glycerophosphoryl diester phosphodiesterase homologue Not tested Type-I SCCmec Protein 9e-64 57
SAMSHR1132_00300 YP_005324554.1 glycerophosphoryl diester phosphodiesterase Not tested Type-IIIinv SCCmec Protein 1e-63 57
unnamed BAG06197.1 glycerophophory diester phosphodiesterase Not tested Type-VII SCCmec Protein 9e-64 57
ugpQ BAB47627.1 glycerophosphoryldiester phophodiesterase Not tested Type-III SCCmec Protein 9e-64 57
MW0029 NP_644844.1 hypothetical protein Not tested Type-IV SCCmec Protein 1e-63 57
ugpQ BAC57476.1 glycerophosphoryl diester phosphodiesterase homolog Not tested Type-IIIinv SCCmec Protein 9e-64 57
SAV0039 NP_370563.1 glycerophosphoryl diester phosphodiesterase-like protein Not tested Type-II SCCmec Protein 1e-63 57