|
Name : SPSE_1413 (SPSE_1413) Accession : YP_006015512.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Unknown Product : PTS system glucose-specific transporter subunit IIBC Function : - COG functional category : - COG ID : - EC number : 2.7.1.69 Position : 1437275 - 1439314 bp Length : 2040 bp Strand : - Note : identified by match to protein family HMM PF00358, match to protein family HMM PF00367, match to protein family HMM PF02378, match to protein family HMM TIGR00826, match to protein family HMM TIGR00830, match to protein family HMM TIGR02002 DNA sequence : GTGAGGAAAAAACTATTTGGACAATTGCAACGTATCGGTAAAGCATTAATGTTACCTGTTGCTATTTTACCAGCTGCCGG TTTGTTACTCGCATTCGGTGCAGCATTACAAGGGGAACAACTGCAATCGTATTTACCATTCATTCAAGCTGATGGGGTAC AAAACGTCGCAGAAATGATGGCAGCAGCCGGTAGTATCATTTTTGAAAACTTGCCAATTATTTTTGCTATGGGTGTTGCG ATTGGTTTAGCAGGCGGTGACGGGGTTGCAGCCATTGCAGCTTTCGTTGGTTTTATCATTTTGAACAAAACGATGGGTGA ATTTTTAGGGGTTACTCCTGACAACGTGGGTGACGCTGCGAAAGGTTATGCGAGCGTCTTAGGTATTCCGACATTACAAA CAGGGGTGTTCGGGGGTATCATTATCGGTGCTCTCGCGGCATGGTGTTACAACAAGTTTTATAACATTTCGTTACCGTCA TATCTTGGCTTCTTTGCAGGAAAACGATTTGTACCAATTGTGATGGCGACAACATCATTTTTACTTGCATTCCCAATGGC ACTCGTTTGGCCAGTGATTCAAAATGGTTTAAACGCATTCAGTGAAGGGTTATTAGATTCCAACACGGGTTTAGCAGTCT TTTTATTTGGTTTTATTAAGCGTTTATTAATTCCATTCGGTTTACACCATATTTTCCATGCGCCATTCTGGTTTGAATTT GGTTCATATACAAATATGGCGGGTGAAATTATTCGTGGTGACCAACGTATCTTTATCGAACAAATTCGTGAAGGTACAAA CTTAACAGCAGGTAAATTCATGCAAGGTGAATTCCCAGTAATGATGTTCGGTTTACCAGCTGCAGCATTAGCGATTTATC ATACTGCAAAACCTGAAAACAAAAAAGTAGTTGCCGGTTTGATGGGTTCAGCAGCATTAACATCATTCTTAACAGGTATT ACAGAACCATTAGAGTTTTCATTTTTATTTGTAGCACCATTATTATTCTTTATTCATGCTATATTAGACGGTTTAAGTTT CTTAATTTTATACTTGCTTGATTTACATTTAGGTTACACATTCTCTGGTGGCTTTATCGACTTTGTATTACTCGGTATCT TGCCAAATAAAACGCATTGGTGGCTCGTGATTCCAGTCGGACTTGTGTATGGTGTTATTTACTATTCAATCTTCCGCTTC TTAATTACGAAGATGAATTACAAAACGCCAGGACGTGAGGATAAACAAACTGAAACGACGAAAACGACTGCAAGCGAATT GCCTTATGCTGTATTACAAGCGATGGGTGACAAAGATAACATCAAGCATTTAGATGCATGTATTACAAGATTACGTGTTG AAGTGAACGATAAATCAAAAGTCGACGTAGCACGTTTGAAAGATTTAGGTGCTTCAGGTGTTTTAGAAGTCGGCAACAAT ATGCAAGCGATTTTCGGACCGAAATCAGACCAAATCAAACACGAAATGCAACAAATTATGTCAGGTCAAGCTGTACAACA CCCTGTAGATTTAGATGAAGATAAGGACGAAGCAGTTGTGATTGATGAAGCTGCAGACACGACGGCTGTTACGAAAACAG GACAAGTTGTCGCGCCAATGGATGGTGAGGTTGTACCATTATCTGAAGTACCCGATCAAGTCTTTAGTGAAAAAATGATG GGTGAAGGGATTGCAATTCGTCCAACGAGTGGTGAAGTGTATGCACCATTTGATGGTAAGATTCAAATGATTTTCCCAAC TAAACATGCATTCGGCCTAGTGTCTGACAATGGTTTAGAATTATTGATTCATGTTGGTTTAGATACTGTAAAATTAAACG GTGAAGGGTTTACAGTTCATGTTGAAGAAGGTCAAACGATAAAAGCGGGCGATCATTTAATGACAGTGGACTTAGAGCTT ATCCGCGCATCTGCGAAAAGTGATATCACGCCGATTATTGTGACGCAATCCGAAGTGACAGCGTTAAAATTTACAGAGGC GAAAGATGTCAAACATGGTGACAAGTTATTTGAAATCTAA Protein sequence : MRKKLFGQLQRIGKALMLPVAILPAAGLLLAFGAALQGEQLQSYLPFIQADGVQNVAEMMAAAGSIIFENLPIIFAMGVA IGLAGGDGVAAIAAFVGFIILNKTMGEFLGVTPDNVGDAAKGYASVLGIPTLQTGVFGGIIIGALAAWCYNKFYNISLPS YLGFFAGKRFVPIVMATTSFLLAFPMALVWPVIQNGLNAFSEGLLDSNTGLAVFLFGFIKRLLIPFGLHHIFHAPFWFEF GSYTNMAGEIIRGDQRIFIEQIREGTNLTAGKFMQGEFPVMMFGLPAAALAIYHTAKPENKKVVAGLMGSAALTSFLTGI TEPLEFSFLFVAPLLFFIHAILDGLSFLILYLLDLHLGYTFSGGFIDFVLLGILPNKTHWWLVIPVGLVYGVIYYSIFRF LITKMNYKTPGREDKQTETTKTTASELPYAVLQAMGDKDNIKHLDACITRLRVEVNDKSKVDVARLKDLGASGVLEVGNN MQAIFGPKSDQIKHEMQQIMSGQAVQHPVDLDEDKDEAVVIDEAADTTAVTKTGQVVAPMDGEVVPLSEVPDQVFSEKMM GEGIAIRPTSGEVYAPFDGKIQMIFPTKHAFGLVSDNGLELLIHVGLDTVKLNGEGFTVHVEEGQTIKAGDHLMTVDLEL IRASAKSDITPIIVTQSEVTALKFTEAKDVKHGDKLFEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_2642 | YP_859416.1 | PTS system, glucose-specific IIBC component | Not tested | Not named | Protein | 5e-95 | 46 |
