Gene Information

Name : phoP (SPSE_1108)
Accession : YP_006015220.1
Strain : Staphylococcus pseudintermedius ED99
Genome accession: NC_017568
Putative virulence/resistance : Resistance
Product : alkaline phosphatase synthesis transcriptional regulatory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1140855 - 1141559 bp
Length : 705 bp
Strand : +
Note : identified by match to protein family HMM PF00072, match to protein family HMM PF00486

DNA sequence :
ATGGCTCAAAGAGTGCTTGTCGTTGATGACGAACAATCCATTGTCACTTTGCTAAAATACAACCTCGAACAATCAGGTTA
TGTCGTTGAAGTGGCTCAAGATGGAGAGGAAGCGTTACAAAAAGAAAAAGAAACGAAACCCGACTTGATTGTATTGGATG
TGATGTTACCGAAAAAGGATGGCATTGAAGTATGTAAAACGATTCGCTCAGATAAAAACCAAGTACCTATTTTAATGTTA
ACTGCAAAGGATGATGAATTTGATCGTGTGCTTGGTTTAGAGCTTGGCGCTGACGATTATATGACTAAGCCTTTTTCACC
GAGAGAAGTAGTCGCACGTGTGAAAGCCATTCTTCGTCGTTCATCATTAGTGGATCATGTACGAAAAGAAGAAGAGGATG
AAGATATTGTTATTGGTAGTATTAGAATTCGTCCTGACTTTTTTGAAGTATACCGCAATGATGAGTTGCTAGAGTTAACG
CCGAAAGAATTTGAGTTGCTACTTTACTTAGTTGAACGTCAAGGTCGTGTCATTACGCGTGAACATATGTTAAATTCTGT
GTGGAACTATGAATTTGCAGGTGATTCTCGAATTGTGGATGTACATATTAGTCATTTGCGAGATAAGTTAGAAGAAAATC
CGAAGCAACCTCAGTTTATTAAAACAGTTCGCGGTTTAGGATATAAATTGGAGCGTCCTAAATAA

Protein sequence :
MAQRVLVVDDEQSIVTLLKYNLEQSGYVVEVAQDGEEALQKEKETKPDLIVLDVMLPKKDGIEVCKTIRSDKNQVPILML
TAKDDEFDRVLGLELGADDYMTKPFSPREVVARVKAILRRSSLVDHVRKEEEDEDIVIGSIRIRPDFFEVYRNDELLELT
PKEFELLLYLVERQGRVITREHMLNSVWNYEFAGDSRIVDVHISHLRDKLEENPKQPQFIKTVRGLGYKLERPK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 3e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein NC_002952.2859905.p0 Protein 6e-93 83
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein NC_013450.8614421.p0 Protein 7e-93 83
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein NC_007793.3914279.p0 Protein 7e-93 83
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein NC_002745.1124361.p0 Protein 7e-93 83
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein NC_009782.5559369.p0 Protein 7e-93 83
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein NC_002951.3237708.p0 Protein 7e-93 83
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein NC_003923.1003749.p0 Protein 7e-93 83
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein NC_002758.1121668.p0 Protein 7e-93 83
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein NC_007622.3794472.p0 Protein 6e-93 83
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein NC_009641.5332272.p0 Protein 7e-93 83
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein HE999704.1.gene2815. Protein 7e-70 59
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein AE016830.1.gene1681. Protein 4e-62 53
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein NC_012469.1.7685629. Protein 8e-52 52
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein NC_012469.1.7686381. Protein 5e-60 50
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein AE000516.2.gene3505. Protein 1e-42 45
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein BAC0125 Protein 2e-37 44
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein CP004022.1.gene3215. Protein 2e-39 44
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein CP001918.1.gene5135. Protein 1e-31 44
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein EU250284.1.orf4.gene Protein 2e-41 43
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein CP001485.1.gene721.p Protein 2e-35 43
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein CP000647.1.gene4257. Protein 1e-35 43
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein CP001138.1.gene4273. Protein 4e-36 43
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein FJ349556.1.orf0.gene Protein 5e-42 43
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein BAC0533 Protein 1e-35 43
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein NC_005054.2598277.p0 Protein 5e-42 42
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein NC_014475.1.orf0.gen Protein 5e-42 42
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein NC_002695.1.915041.p Protein 4e-36 42
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein CP000034.1.gene3834. Protein 4e-36 42
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein NC_002695.1.916589.p Protein 2e-40 42
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein BAC0039 Protein 2e-40 42
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein BAC0596 Protein 4e-39 42
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein CP000647.1.gene2531. Protein 3e-40 42
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein CP000034.1.gene2186. Protein 2e-40 42
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein CP001138.1.gene2239. Protein 4e-39 42
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein CP001918.1.gene3444. Protein 7e-40 42
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein AF310956.2.orf0.gene Protein 1e-36 41
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein AF162694.1.orf4.gene Protein 3e-38 41
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein AF130997.1.orf0.gene Protein 2e-37 41
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein DQ212986.1.gene4.p01 Protein 3e-39 41
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein AF155139.2.orf0.gene Protein 9e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein VFG1386 Protein 3e-41 42
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein VFG1389 Protein 1e-33 42
phoP YP_006015220.1 alkaline phosphatase synthesis transcriptional regulatory protein VFG1390 Protein 2e-40 41