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Name : serS (SPSE_0010) Accession : YP_006014202.1 Strain : Staphylococcus pseudintermedius ED99 Genome accession: NC_017568 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 13187 - 14467 bp Length : 1281 bp Strand : + Note : identified by match to protein family HMM PF00587, match to protein family HMM PF02403, match to protein family HMM TIGR00414 DNA sequence : ATGTTAGACATTAAATTATTTAGAAATGAGCCAGAGAGAGTTAAGGAGAAAATTGCGTTACGTCAAATGGATCCATCAGT TGTAGATGAAGTGTTAGCGTTAGACCAACAACGCCGTGATTACATACAACAAACTGAAGAATTAAAAGCAGAACGTAACA AAGCTTCTCAACAAATTGCTGAAAAGAAACGTAATAAAGAAAATGCGGATGATGCGATTAAAGCGCAACGTGAAGTAGGA GAAAAAATTAAAAATATCGATGCACAGTTAAAAGAAACGGATACGAAATTAAATGACATCTTATCACGTATTCCAAACCT TATTCACGATGATGTGCCTGAAGGTGAAGATGATTCTGATAACGTAGAACTTAAAAGATGGGGAACACCACGTGAGTTCG ACTTTGAAGCAAAAGCGCACTGGGACTTAGTAGAATCACTAGAAATGGCAGACTTTGATCGTGCCGCACGTGTGTCTGGT GCACGTTTCGTTTATTTAACGAATGACGGTGCTAAATTAGAGCGTGCATTAATGAACTTTATGATTACGATGCATACGAC ACAACATGGTTATCGCGAAATGATGGTACCACAGTTGGTGAATGCTAAAGCGATGTACGGTACAGGTCAATTACCTAAAT TTGAAGAAGATTTGTTTAAAGTAGAAAAAGAAGGCTTATACACAATTCCAACTGCTGAAGTGCCTTTGACAAACTACTAT AGAGACGAAATTGTACAGCCGGGGGTCTTACCAGCTAAGTTTACAGGTCAATCAGCATGTTTCAGAAGTGAAGCGGGATC AGCTGGCCGTGATACACGTGGCTTAATCCGTCTGCACCAATTCAATAAAGTTGAAATGGTGCGTATTGAAAAACCTGAAG ATTCTTGGGATGCTTTAGAAGAAATGACATCAAATGCAGAAGCGATTCTTGAAGCATTGAACTTACCATACCGTCGTGTG ATTTTATGTACAGGCGATATTGGTTTCGGTGCAAGTAAAACATATGACTTAGAAGTATGGTTACCAAGCTACAGTGACTA TAAAGAAATTAGTTCATGTTCAAACTGTGTAGATTTCCAAGCGCGTCGTGCCAATATCCGTTTCAAACGTGATAAAGATG CCAAACCTGAATATGCACATACGTTAAATGGTTCAGGTTTAGCAGTAGGTCGTACATTTGCGGCGATTGTAGAGAACTAT CAAAATGAAGACGGTACGATTACAGTGCCTGAAGCGTTAGTCCCATTCATGGGTGGTCAAACAGTTATCAAACCGCTTTA A Protein sequence : MLDIKLFRNEPERVKEKIALRQMDPSVVDEVLALDQQRRDYIQQTEELKAERNKASQQIAEKKRNKENADDAIKAQREVG EKIKNIDAQLKETDTKLNDILSRIPNLIHDDVPEGEDDSDNVELKRWGTPREFDFEAKAHWDLVESLEMADFDRAARVSG ARFVYLTNDGAKLERALMNFMITMHTTQHGYREMMVPQLVNAKAMYGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTNYY RDEIVQPGVLPAKFTGQSACFRSEAGSAGRDTRGLIRLHQFNKVEMVRIEKPEDSWDALEEMTSNAEAILEALNLPYRRV ILCTGDIGFGASKTYDLEVWLPSYSDYKEISSCSNCVDFQARRANIRFKRDKDAKPEYAHTLNGSGLAVGRTFAAIVENY QNEDGTITVPEALVPFMGGQTVIKPL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 6e-118 | 59 |
