Gene Information

Name : SDE12394_04825 (SDE12394_04825)
Accession : YP_006013039.1
Strain : Streptococcus dysgalactiae ATCC 12394
Genome accession: NC_017567
Putative virulence/resistance : Unknown
Product : Tn5252, relaxase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 932681 - 934546 bp
Length : 1866 bp
Strand : +
Note : -

DNA sequence :
ATGGTCATCACTAAGCATTATGCTGTTCATGGGAAAAAATACCGCCGTCAATTGATTAAGTATATTCTTGATCCTAAGAA
AACCAGGAATTTATCATTGATTTCAGATTTTGGGATGAGTAATTATCTTGATTTTCCTGACTATGTGGAACTGGTGAAGA
TGTATCAAAATAATTTTCTTTCAAATGACCAACTCTACGACTCACGGTTTGATAGACAAGAGAAAAAGCAACAGAAAATA
CATGCTCATCATATTATTCAGTCTTTCTCACCTGAAGATAAATTAAGCCCAGAGGAAATCAATCGTATTGGCTATGAAAC
GATAAAAGAGTTGATAGGTGGTCAATATAAATTCATTGTTGCCACTCATGTTGATCAGGACCATTGTCATAATCACATTA
TTATCAACTCAATCAATAGCCAATCTCAAAAAAAGTTGAAGTGGGACTACGCTCTTGAAAGAAATTTACAAATGATTTCG
GATAGAATTTCTAAAGTAGCGGGTGCTAAAATCATTCCACCTAAACGTTATTCTCATAGAGATTATGAGGTCTATCGACG
TTCTAATCACAAATACGAATTGAAGCAGCGGTTATTTTTTCTCATGGAACATTCAATTGATTTCAATGATTTTATGCAAA
AAGCTGAGCAACTAAATGTCAAAATAGATTTCTCAAGGAAACATAGCCGATTTTTTATGACAGATAGAAATATGAAGCAA
GTCATCCAAGGAGATAAGCTGAATAAGAGAGAACCCTATTCAAAAGAATATTTTCAACGTTACTTTGCCAAGAAAAAGAT
TGAACTGATTTTAGAATTTTTATTGCTAAGATCCAACTCATTTGATGATTTAGTTGAGAAAGCTCGGTTACTGGGATTAG
AATTGAAGAGCAAGAAAAAAACGATAGATTTTGTTCTTTCTGATGGAAAAAGCTGCATTTCCATACCAAATAAGTCATTA
AGAAAGAAAAATCTTTATGATACTACGTATTTTGATAGTTATTTCAAGGAACATGATGTGTTTGAAGTGCTTCATAATAA
TGAAGTAAAAATAGAATTTGAAAAGTTTGAGACACAACAGCTTTCAGAAATATTGACTGTAGAAGAAATAACCGAAGCTT
ATGAAACGTATAAAACTAAGAGAGATGCTGTACATGAGTTTGAAGTTGAGATCACGGAGGAGCAAATTGAAAAAATTGTG
CTAGATGGTCTATTTGTTAAAGTTTGGATGGGTATTGGACAAGAAGGACTAATCTTCATTCCAAATCATCAACTTAATAT
CTTAGAACAAGAAAATAAGAAGCAGTATCAGGTGTTTATTCGAGAAACATCTTCTTATTTCATTTATCATAAAGAGGACT
CAGAAATGAATCGATTTATGAAAGGAAGGGACTTGATTCGCCAACTAACGTTTGACAATAAGTCTTTACCTTATAAGAGA
CGAATAAGTCTGGTCAGTCTTCAACAAAAAATTGAAGAAATCAATTTATTGATGACATTAAACATTCAAAATAAATCCTT
TCTAGAATTAAAAGATGAATTGGTTGGAGACATCGCACAGCTAGATATTGAATTGACAAATCTTCAAGACAAAAACACCA
CCTTAAACAAGATGGCAGAAGTAGTTGTTAACCTACAAAGTGATAATCAAGATACCAAGCAATTAGCTAAGTATGAATGT
TCCAAGATGAATTTATCGCAGAATGTAACAATTGGACAGATTGAATCTGAGATTGAAATGATACAGAATCAGCTAGACAA
TAAAATCGAAGAATACGAAAATGCGGTTAGAAAGTTGGATGAATATGTAAGAGTTTTAAATATGGATAAATACAAGACAG
ACGATTTTTCCATTCATATTGAATAA

Protein sequence :
MVITKHYAVHGKKYRRQLIKYILDPKKTRNLSLISDFGMSNYLDFPDYVELVKMYQNNFLSNDQLYDSRFDRQEKKQQKI
HAHHIIQSFSPEDKLSPEEINRIGYETIKELIGGQYKFIVATHVDQDHCHNHIIINSINSQSQKKLKWDYALERNLQMIS
DRISKVAGAKIIPPKRYSHRDYEVYRRSNHKYELKQRLFFLMEHSIDFNDFMQKAEQLNVKIDFSRKHSRFFMTDRNMKQ
VIQGDKLNKREPYSKEYFQRYFAKKKIELILEFLLLRSNSFDDLVEKARLLGLELKSKKKTIDFVLSDGKSCISIPNKSL
RKKNLYDTTYFDSYFKEHDVFEVLHNNEVKIEFEKFETQQLSEILTVEEITEAYETYKTKRDAVHEFEVEITEEQIEKIV
LDGLFVKVWMGIGQEGLIFIPNHQLNILEQENKKQYQVFIRETSSYFIYHKEDSEMNRFMKGRDLIRQLTFDNKSLPYKR
RISLVSLQQKIEEINLLMTLNIQNKSFLELKDELVGDIAQLDIELTNLQDKNTTLNKMAEVVVNLQSDNQDTKQLAKYEC
SKMNLSQNVTIGQIESEIEMIQNQLDNKIEEYENAVRKLDEYVRVLNMDKYKTDDFSIHIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSU05_0913 YP_001198279.1 chromosome segregation ATPase Not tested 89K Protein 1e-165 59
SSU98_0919 YP_001200477.1 chromosome segregation ATPase Not tested 89K Protein 8e-165 58
Spaf_1098 YP_006309900.1 relaxase Not tested FWisland_1 Protein 7e-155 56
SP_1056 NP_345530.1 Tn5252, relaxase Not tested PPI-1 Protein 2e-134 51