|
Name : SDE12394_04640 (SDE12394_04640) Accession : YP_006013004.1 Strain : Streptococcus dysgalactiae ATCC 12394 Genome accession: NC_017567 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 896310 - 899111 bp Length : 2802 bp Strand : + Note : COG3942 Surface antigen DNA sequence : ATGAAAGAGGATAAAAAGCTAGTCAAACAGGCTAGGCAAAACTTTCGAAGCAACTTAAAATCAGCTCGTATGCATTATCG GAAAGAAGTTAGGACCTTAAAACAGACTGTTCCTAAAAAAGGAAGATTTCGAAAATCAGCCAAAAATTCTCTGTTTCAGG AAAAGAAAACAGAGTTAAAAGGAAATCTACTCAGTAGCCAAAAGGAAGCAGAAGAGAAGTTCATAAAGGAAATTACCTAT GTTTCTCCTAGACTGTTGAAGGCAAAGGAAATCAAGAACTATCGACTTCCGCAAGCTCAAGAACGTTTGCGGACGGCAAG AAAACATCTGTCAGAAGTGAAACTAAGTGAGAAACAGCAGGTAGTTAATCCCAAGTTTACTTTCCAAAAAGAAAATCCTT CCCTGAAGTCTCGCTTTCAGTTTCACCAAGAAAAATCATTTGATCGGCTAAGTGCAGAAAAAGACGTAAGTTCTGCCAAG CGTGAGGTTAAACAACTCAAGAAAGTCCAAAAGACTAAGAAAAACTCTACCAAAGTCAAAGCTGGATTAGGCTTGGCTGC ATCTGAATCCCTTGACCTGATAGCACAGGAGGATGATTTAGATGGTCTAAGAACCATGAAGGATACTAGTTTGAAAGCCA GACGCTATGGCAGGTTTACTTATCAAGCAGGTAAGGTGGCAGTAAAAAGTGGACAGACTGGTGTGCGGTTTACCAAAACA AAATTTTCTCATGGAAAGGAACGATTCCAGAACTTCAAAAAGGGAAAAGGATTCACACGCCAGAAACCTCTTAAACCAAG AAGACGCTACCAAACCTTTTTAAATCATGTCAGAAAACAAAGTGTCGCAGGTTTTAAAGGAATCGTCCAAGCCATTAAGG GAAGTATGACTTTCTTTTCTGTCCTTGCGGGAAATCCTTTGACTTGGATTGTCTCAGGCATTCTCTTGATACTCCTTTTG ATGATGAGCTTTTTCATGAGTGTTTCAGGTAGTAGTGTCATACAACAAGATGAAATAGAATTGAGTAAGAGTTATACCCA CATGACGTGGGAAGATGCGGAACATACAAGAACCAACGATAAGGGAATTACCTTTTACACTAAGATTGATGAGGTCATGG TTTACATGAATCATCAATACCAAGACTACAAGTTAGATGATTTCATAGAGACAAGCGGAACAACCTACAAAGAATTTCTC AGTCAACTGTGGTCGGACTTAAACGGTGGAGATTCTATTAAATCCATGTCTGACTTATATAAAGAACCTGCTTACAAGCT GTCTGATGAGGACCAAGAAGAACTAAACGAATTGACCGAAGAAGGCAACTATTTAGCCCTTCAAGAATTGGACAATCCCT TTCAGGGACAGACCGATGAGGATAGTTTAAGCATGACCTACCGATATGGTTATGAGGTCATTGATGAGAAACCAACGCTT CATCATCATATCATCTTAGAAGCAAAAGAAGGTCAAGTCATTGTAGCTCCGATGGATGGCAAGGTATCTCTTGATGGAGA GAACGTTGTTTTGACATCTGGTAAGGGAGTGAATAAGACTAAACTAACCTTGTTTGGCATTCATTCAGGCCGAGTGAGTG AAAATCAACAAGTCTTGGCAGGAGATATTATTGGTCAGACCAAAGACGGAACGGGTCTAAAAGTCACCTATCAAAAGGTT GATGATGACACGGATAAGTTGGTCTATGTCAATCCAGCATTCTACTTTCCAAAAGTGATTCAGGTTCAGACCACCATTCT TCCAACTATCGGTCAGTTTGGCGGCGATGAGTTCGAGAGAGCCAAGGCAATTTATGACTATCTTAAAAGCAAAGGTGCGA CCAATCAAGCTATCGCAGCCATTCTAGGTAACTGGTCGGTAGAATCCTCCATTAATCCAAAACGAGCTGAAGGCGACTAT TTATCTCCACCTGTTGGTGCGACAGATAGTTCGTGGGATGATGAGGGCTGGCTCACACTTAATGGTCCAACTATATACAA TGGACGTTACCCAAATATTCTCAAACGTGGTTTAGGCTTAGGCCAATGGACAGATACCGCGGATGGTTCACGCAGACATA CTTTATTGTTGGAATATGCCAAAGGAAAACATCAAAAATGGTATGACTTAGGCTTACAACTGGATTTCATGTTGTATGGG GATAGTCCTTATTACACCAACTGGTTAAAGGACTTCTTCAAAAATTCAGGCAGTCCAGCTAGTCTTGCCCAGCTCTTTCT CATTTACTGGGAAGGAAATAGTGGTGATAAGCTACTTGAACGTCAAACACGAGCCAGTGAGTGGTATTACCAAATTGAAA AAGGCTTTAGTCAACCTAACGGTGGGACAGCACAAAGCGATCCAAAAGCACTTGAAGCTGTACGAGAAGACCTTTTTGAA AACTCTATTCCAGGAGGTGGTGACGGTATGGGTTACGCTTACGGCCAATGTACTTGGGGAGTCGCAGCCCGTATCAATCA ACTGGGTCTAAAACTCAAAGGTAAAAACGGTGAGAAGATTCCAATTATCAGTACCATGGGCAATGGCCAAGATTGGGTAC GAACAGCCGCAAGTCTCGGTGGAGAGACAGGGACAAGTCCACAAGAAGGAGCTATCCTTTCCTTTGCGGGAGGAGGACAT GGCACCCCAACAGAATACGGACATGTGGCTTTTGTGGAGAAAGTCTACCCAGACGGTTCATTCCTTATCTCAGAAACCAA CTACAATGGCAATCCAAACTATACCTTCCGTAAATTATCTGGAGTGGATAGTAGCTTGAGTTTTGCTTATACGACGAAAT AA Protein sequence : MKEDKKLVKQARQNFRSNLKSARMHYRKEVRTLKQTVPKKGRFRKSAKNSLFQEKKTELKGNLLSSQKEAEEKFIKEITY VSPRLLKAKEIKNYRLPQAQERLRTARKHLSEVKLSEKQQVVNPKFTFQKENPSLKSRFQFHQEKSFDRLSAEKDVSSAK REVKQLKKVQKTKKNSTKVKAGLGLAASESLDLIAQEDDLDGLRTMKDTSLKARRYGRFTYQAGKVAVKSGQTGVRFTKT KFSHGKERFQNFKKGKGFTRQKPLKPRRRYQTFLNHVRKQSVAGFKGIVQAIKGSMTFFSVLAGNPLTWIVSGILLILLL MMSFFMSVSGSSVIQQDEIELSKSYTHMTWEDAEHTRTNDKGITFYTKIDEVMVYMNHQYQDYKLDDFIETSGTTYKEFL SQLWSDLNGGDSIKSMSDLYKEPAYKLSDEDQEELNELTEEGNYLALQELDNPFQGQTDEDSLSMTYRYGYEVIDEKPTL HHHIILEAKEGQVIVAPMDGKVSLDGENVVLTSGKGVNKTKLTLFGIHSGRVSENQQVLAGDIIGQTKDGTGLKVTYQKV DDDTDKLVYVNPAFYFPKVIQVQTTILPTIGQFGGDEFERAKAIYDYLKSKGATNQAIAAILGNWSVESSINPKRAEGDY LSPPVGATDSSWDDEGWLTLNGPTIYNGRYPNILKRGLGLGQWTDTADGSRRHTLLLEYAKGKHQKWYDLGLQLDFMLYG DSPYYTNWLKDFFKNSGSPASLAQLFLIYWEGNSGDKLLERQTRASEWYYQIEKGFSQPNGGTAQSDPKALEAVREDLFE NSIPGGGDGMGYAYGQCTWGVAARINQLGLKLKGKNGEKIPIISTMGNGQDWVRTAASLGGETGTSPQEGAILSFAGGGH GTPTEYGHVAFVEKVYPDGSFLISETNYNGNPNYTFRKLSGVDSSLSFAYTTK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSU98_0981 | YP_001200539.1 | Tn5252, Orf28 | Not tested | 89K | Protein | 0.0 | 96 |
| SSU05_0968 | YP_001198334.1 | Tn5252, Orf28 | Not tested | 89K | Protein | 0.0 | 96 |
| Spaf_1124 | YP_006309926.1 | putative conjugal transfer protein | Not tested | FWisland_1 | Protein | 0.0 | 60 |
