Gene Information

Name : SDE12394_04295 (SDE12394_04295)
Accession : YP_006012941.1
Strain : Streptococcus dysgalactiae ATCC 12394
Genome accession: NC_017567
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 829456 - 830166 bp
Length : 711 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
GTGCCAGATGACAAAAAAGAATTAATGCGATTAACAAATATTGTTAAGAGTTATCGAAATGGTGAACAAGACCTTAAGGT
TTTAAAAGACATCAACTTAACAGTTTATGAAGGAGAGTTCCTAGCCATAATGGGACCATCTGGTTCAGGAAAATCTACCT
TGATGAATATTATTGGTCTATTGGACCGGGCAACCTCGGGAGACTATGTCCTAAATGGAACAGAAGTTGAGGTTCTTAGC
GATAGAAAACTAGCTCAAGTTCGAAACGAAGAAATTGGCTTTGTTTTCCAACAATTCTTTCTCTTAGCAAAACTGAATGC
TCTCCAAAACGTTGAACTTCCTCTGATTTATGCGGGAGTTAGTGTGTCAAAACGTCGCGAACGCGCCAAAAAATTTTTAG
AAAAAGTAGAACTTGGCATGCGTATGAAACATCTACCTTCAGAATTATCAGGTGGACAAAAACAAAGGGTAGCTATCGCT
CGTGCATTAGTGAATAATCCATCTATTATTTTGGCAGATGAGCCAACAGGTGCGCTTGATACCAAAACAGGTCAACAAAT
CATGGAACTGTTAACAGAATTAAATCAAGAAGGAAAAACCATTATTATGGTTACCCATGAACCTGAAATTGCTGATTTTG
CAACCCGTAAAATCATTATCCGAGATGGTGAGATTACCACTGACACCACTGAAAGTGTCAGAATTGACTAG

Protein sequence : 
MPDDKKELMRLTNIVKSYRNGEQDLKVLKDINLTVYEGEFLAIMGPSGSGKSTLMNIIGLLDRATSGDYVLNGTEVEVLS
DRKLAQVRNEEIGFVFQQFFLLAKLNALQNVELPLIYAGVSVSKRRERAKKFLEKVELGMRMKHLPSELSGGQKQRVAIA
RALVNNPSIILADEPTGALDTKTGQQIMELLTELNQEGKTIIMVTHEPEIADFATRKIIIRDGEITTDTTESVRID

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SDE12394_04295 YP_006012941.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-81 75
SDE12394_04295 YP_006012941.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-46 49
SDE12394_04295 YP_006012941.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 7e-38 46
SDE12394_04295 YP_006012941.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 1e-35 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SDE12394_04295 YP_006012941.1 ABC transporter ATP-binding protein VFG0869 Protein 3e-28 41