Gene Information

Name : lysS (SDE12394_03265)
Accession : YP_006012756.1
Strain : Streptococcus dysgalactiae ATCC 12394
Genome accession: NC_017567
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : -
COG ID : -
EC number : 6.1.1.6
Position : 621573 - 623075 bp
Length : 1503 bp
Strand : -
Note : COG1190 Lysyl-tRNA synthetase (class II)

DNA sequence :
TTGGAGGAAAATATGTCTAATCAACACATCGAAGAATTAAATGACCAACAGATTGTCCGTCGTGAAAAGATGATGGCTCT
GGCTGAACAAGGAATTGATCCTTTCGGTAAACGCTTTGACCGCACAGCCAATTCTGCTGAATTAAAAGAAAAGTATGCTG
ATAAAACAAAAGAAGAATTACATGAGTTAAACGAAACAGCTATTGTTGCTGGCCGCTTGATGACAAAACGTGGCAAAGGT
AAGGTTGGTTTTGCTCATCTTCAAGACCGGGAAGGCCAAATCCAACTTTATGTTCGCAAGGACTCTGTTGGCGAAGACAA
CTATGAAATCTTCAAAAAAGCCGATTTAGGCGACTTTATCGGCGTTGAAGGCGAAGTCATGCGTACAGACATGGGCGAGT
TGTCAATCAAGGCAACCAAGTTGACTCACCTTTCTAAATCACTTCGTCCTCTTCCTGAAAAATTCCACGGATTAACTGAT
ATTGAAACCATTTACCGTAAGCGTCACCTTGATTTAATTTCAAATCGTGAAAGCTTTGACCGCTTCGTGACCCGTTCCAA
AATGATTTCAGAAATCCGTCGTTATTTAGACGGACTTGATTTCCTAGAAGTAGAAACGCCTGTGCTTCATAACGAAGCTG
GTGGTGCTGCTGCTCGTCCTTTCGTTACTCACCATAATGCTCAAAACATTGACATGGTACTTCGTATCGCAACAGAACTT
CATTTGAAACGTTTGATTGTTGGTGGTATGGAACGTGTTTACGAAATTGGTCGTATCTTCCGTAATGAGGGAATGGATGC
CACTCATAATCCTGAGTTCACTTCTATCGAGGTTTACCAAGCTTACGCAGATTACCTTGACATCATGAACTTGACAGAAG
GCATTATCCAACATGCCGCTAAAGCTGTTAAAGGTGATGGGCCTATTGATTATCAAGGAACTGAAATCCGTATCAATGAA
CCTTTCAAACGTGTCCACATGGTAGATGCTATCAAGGAAGTGACAGGTGTTGATTTCTGGCCTGAAATGACTGTCGAAGA
AGCTATTGCACTTGCCAAAGAAAAACAGGTACCACTCGAAAAACACTTCACAAGTGTTGGACATATCATCAATGCTTTCT
TCGAAGAATTTGTTGAAGAAACCTTGGTCCAACCAACCTTTGTCTTTGGGCATCCTGTTGAAGTATCACCTTTGGCTAAG
AAGAATCCAGAAGATACCCGCTTCACCGACCGCTTCGAACTTTTCATCATGACCAAAGAATACGCCAATGCTTTCACAGA
GTTAAATGATCCCATTGACCAATTATCTCGTTTTGAAGCACAAGCACAAGCCAAAGAACTTGGTGATGACGAAGCAACTG
GCATTGACTACGACTTCGTTGAAGCTCTTGAATATGGTATGCCGCCAACCGGTGGACTCGGAATTGGTATTGACCGTCTC
TGCATGTTATTAACAAACACAACAACTATCCGAGATGTACTACTTTTCCCAACAATGAAGTAA

Protein sequence :
MEENMSNQHIEELNDQQIVRREKMMALAEQGIDPFGKRFDRTANSAELKEKYADKTKEELHELNETAIVAGRLMTKRGKG
KVGFAHLQDREGQIQLYVRKDSVGEDNYEIFKKADLGDFIGVEGEVMRTDMGELSIKATKLTHLSKSLRPLPEKFHGLTD
IETIYRKRHLDLISNRESFDRFVTRSKMISEIRRYLDGLDFLEVETPVLHNEAGGAAARPFVTHHNAQNIDMVLRIATEL
HLKRLIVGGMERVYEIGRIFRNEGMDATHNPEFTSIEVYQAYADYLDIMNLTEGIIQHAAKAVKGDGPIDYQGTEIRINE
PFKRVHMVDAIKEVTGVDFWPEMTVEEAIALAKEKQVPLEKHFTSVGHIINAFFEEFVEETLVQPTFVFGHPVEVSPLAK
KNPEDTRFTDRFELFIMTKEYANAFTELNDPIDQLSRFEAQAQAKELGDDEATGIDYDFVEALEYGMPPTGGLGIGIDRL
CMLLTNTTTIRDVLLFPTMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 9e-106 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
lysS YP_006012756.1 lysyl-tRNA synthetase VFG1668 Protein 5e-106 47