Gene Information

Name : SDE12394_05470 (SDE12394_05470)
Accession : YP_006013148.1
Strain : Streptococcus dysgalactiae ATCC 12394
Genome accession: NC_017567
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1055255 - 1056007 bp
Length : 753 bp
Strand : -
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence : 
ATGTTATTAGAAATTAATCACCTCGAAAAAGTCTTTCGCACGCGCTTTTCTAAAGAAGAAACGAGAGCCCTACAAGATGT
TGACTTTAAAGTGGACAAAGGGGAATTTATCGCCATCATGGGTGAGTCTGGCTCAGGAAAAACAACCCTCTTAAATATTT
TAGCAACTTTGGAGAAGCCAACGAATGGTTCCATCTTTTTAAACGGTACCGATGTTACCAAAATCAAAGAAAGTCAACTT
GCTGATTTTCGTCTCCAAAATCTCGGATTTGTTTTTCAAGATTTCAATTTGCTGGATACCTTGTCTGTACGAGACAATAT
TTTCTTGCCTTTAGTGCTAAATCGTAGACCTGTCAAAGAAATGGAATCTCGACTAAATCAAATTACCCCTAAATTACACA
TTGATTCCCTTTTAGACAAACGACCATTTGAACTATCAGGCGGACAAAAACAACGCGTCGCCATTGCTCGAAGTCTCATT
ACACATCCACAATTGTTGCTTGCTGATGAACCCACAGCCGCATTAGACTATCGTAATTCAGATGAACTGCTCAACCTGTT
TGAAGACATTAATAACGACGGTCAGACTATTTTAATGGTTACCCATTCAGCAAACGCTGCGAGCCATGCTAAGCGGGTAT
TATTCATTAAAGACGGCCGTATTTTCCATCAAATCTATCGAGGCAATAAAACCAACTTAGACTTCAACAAAGACATCTCC
ATTGCCATGACAGGCCTTTTAGGAGGTGAGTAG

Protein sequence : 
MLLEINHLEKVFRTRFSKEETRALQDVDFKVDKGEFIAIMGESGSGKTTLLNILATLEKPTNGSIFLNGTDVTKIKESQL
ADFRLQNLGFVFQDFNLLDTLSVRDNIFLPLVLNRRPVKEMESRLNQITPKLHIDSLLDKRPFELSGGQKQRVAIARSLI
THPQLLLADEPTAALDYRNSDELLNLFEDINNDGQTILMVTHSANAASHAKRVLFIKDGRIFHQIYRGNKTNLDFNKDIS
IAMTGLLGGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-30 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-32 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SDE12394_05470 YP_006013148.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 5e-39 44
SDE12394_05470 YP_006013148.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 8e-40 44
SDE12394_05470 YP_006013148.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-36 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SDE12394_05470 YP_006013148.1 ABC transporter ATP-binding protein VFG2059 Protein 3e-18 43