Gene Information

Name : Sput200_0959 (Sput200_0959)
Accession : YP_006008900.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Virulence
Product : ABC hemin transporter, ATPase subunit, HmuD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1066249 - 1067073 bp
Length : 825 bp
Strand : -
Note : KEGG: shw:Sputw3181_3216 hemin importer ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence :
ATGTTGACTAGCCATCTTTCAGAGACGCGTTATTCCAGCACAGTAGATTCAACGCGTACTCAGTTGAATATTTGCCAGCT
AAATGTATCCATTGGACAAAAAGCCGTATTACGGGACATAAATGTGCAATTTCAATCAGGCGCAGTTACGGCATTACTCG
GCCCTAATGGTGCAGGAAAATCAACCTTGCTTAAAGCACTTTGCCAAGAAATCAGCACGCCTAGGCAATGCATACAACTC
GGTCATAGCCAACTGGTGGATTGGCCAAGGAGCGATCTGGCAAAATCCTTAGCGGTACTGCCACAACACGCGAGTTTAAC
GTTTCCCTTTAGTGTGACTGAAGTCGTTGCTATGGGGTTATACCCCTTAACTCTCAGTAAAAAAGAAGGGGATATTCTTG
TTGAGCAAAAACTAGCTGAAGTCGGTTTAACTCATCTGGCTAAGCGCAGCTATCCAACCCTTTCGGGCGGTGAAAAACAG
CGAGTCCAACTCGCCCGCGTGTTAACTCAGCTCAGTCAATCGCCCTTTCCTCCCATACTGTTATTAGATGAACCGACATC
GGCATTAGATCTCGCCCAGCAGCATAGAGTGCTTGAGTTAGCGCAAAACTTAGCTCACCAACAAGCCTACACTGTGATAG
TAGTACTGCATGACCTAAACCAAGCGGCTCGCTATAGCGACCAATTAATCGTATTAAAACAAGGAGAAATAGTAAGCCAA
GGTACACCAACTGAAGCGCTATCGGTAGATATCATTCGAGAAGTATGGGACTACGAGCCTATATATGTCCCTGCCCCACA
GGGGGGGCATCCACTGATTTTTTAA

Protein sequence :
MLTSHLSETRYSSTVDSTRTQLNICQLNVSIGQKAVLRDINVQFQSGAVTALLGPNGAGKSTLLKALCQEISTPRQCIQL
GHSQLVDWPRSDLAKSLAVLPQHASLTFPFSVTEVVAMGLYPLTLSKKEGDILVEQKLAEVGLTHLAKRSYPTLSGGEKQ
RVQLARVLTQLSQSPFPPILLLDEPTSALDLAQQHRVLELAQNLAHQQAYTVIVVLHDLNQAARYSDQLIVLKQGEIVSQ
GTPTEALSVDIIREVWDYEPIYVPAPQGGHPLIF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 5e-31 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-31 43
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-31 43
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-31 43