Gene Information

Name : Sput200_0868 (Sput200_0868)
Accession : YP_006008811.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 960105 - 962099 bp
Length : 1995 bp
Strand : +
Note : KEGG: shw:Sputw3181_3301 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region

DNA sequence :
ATGTCTTCCCGTAAAGTACTCGCCAACGCAATCCGTGCGTTAAGTATGGATGCAGTTCAAAAAGCAAACTCAGGCCACCC
CGGCGCCCCAATGGGCATGGCAGATATTGCTGAAGTGCTGTGGAATGATTTCCTTAAGCACAATCCGAACAATCCGAAAT
GGGTAGATAGAGATCGTTTTATCCTCTCTAACGGTCACGGCTCTATGCTGATCTACTCTTTACTCCACCTGACGGGTTAT
GAACTACCGATTGAAGAACTGAAACAATTCCGTCAATTGCATTCAAAAACCCCAGGTCATCCTGAATATGGCTATACCCC
AGGTGTTGAAACCACAACGGGTCCATTAGGCGCGGGCATTAGTAATGCGGTCGGTATGGCGATTGCCGAAAGAACACTAG
CGGCGCAGTTTAACCGCGACGGCCACGAGATTGTTGATCACTATACTTACTGCTTCCTTGGCGATGGTTGCTTGATGGAA
GGTATTTCCCACGAAGCTTGTTCATTAGCTGGCACTTTAGGTTTAGGTAAGTTAATTGCATTTTGGGATGACAACGGTAT
TTCTATCGACGGCCATGTTGAAGGCTGGTTTACCGATGACACGCCAAAACGTTTCGAAGCTTACGGCTGGCATGTGATTG
CCAATGTTGATGGCCATGATAGCGATGCGATTCGTGCCGCTATTGAAGCGGCGAAAGCCGTGACCGACAAGCCCACCATG
ATCTGCTGCAAAACCATTATCGGTTTCGGTTCGCCAAACAAATCTGGCAGCCACGATTGTCATGGCGCACCATTAGGTGA
TGCTGAAATCGCCGCGGCTCGTGAATTCTTAGGCTGGCCACATGCGCCATTCGAAATCCCTGCCGATGTTTACGCCGGTT
GGGATGCTAAAGAGGCGGGTGCTGCAAGGGAAGCCGCGTGGAACGACAAGTTTGCTGCTTACGCTAAAGCATACCCAGAA
CTGGCTGCAGAGTACGAGCGCCGTGTACTGAAAGGCGAATTACCTGCTGATTTCGAAGCTAAAGCACAGGCATTTATCCA
AGAATGCCAAGATAAAGCCGAAGGTATTGCGAGCCGTAAAGCGTCACAAAATGCCATCGGTGCCTTTGGTGCTATGTTGC
CTGAACTGCTTGGTGGCTCTGCCGACTTAGCGGGTTCTAACTTGACCTTATGGTCAGGTTCTAAAGGGATTCAAGACGAT
CCAGCCGGTAACTATGTGTACTACGGTGTGCGCGAGTTCGGTATGAGTGGCATTATGAACGGCGTGTCACTCCATGGTGG
CTTTATCAACTACGGTGCGACTTTCATGATGTTTATGGAATACGCGCGTAATGCTGTGCGTATGTCTGCACTGATGGGCA
TTCAAAACATCTTCGTTTACACCCATGACTCTATCGGTCAAGGTGAAGACGGCCCAACGCACCAACCCGTTGAGCAATTA
GCTAACCTGCGTATGACGCCAAATATGGCGGTATGGCGCCCCTGTGATGCGGCTGAAACCGCTGTTGCGTGGAAGGCGGC
TATCGAACGTCGTACGGCACCAACATCACTCATCTTCAGCCGTCAAAACCTGAAGGCTCAAGTACGCAGTGCTGAGCAAT
TAGCCAATGTGGCAAAAGGTGCGTACGTACTGCAAGACTGTGCGGGTACACCAGAACTGATCCTGATCGCAACCGGTAGT
GAAGTGCAATTGGCGATGGAAGCGGCAGCGGCTCTGACTGAACAAGGCAAACAAGTTCGCGTAGTTTCTATGCCATCAAA
CACTGAGTTTGATAAGCAAGATGCAGCTTATAAAGAGTCAGTATTACCCCGTGCTGTGACTAAGCGTGTCGCCATTGAAG
CAGCCCATACTGACTTCTGGTACAAGTATGTTGGTTTCGAAGGCACTGTTGTGGGTATGACCACTTTCGGTGAGTCTGCG
CCAGGCAACGTGTTGCTGAAGCATTTCGGTTTCACCGTTGAAAATGTGCTGAATGCAGCAAAATCACTAGGTTAA

Protein sequence :
MSSRKVLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFLKHNPNNPKWVDRDRFILSNGHGSMLIYSLLHLTGY
ELPIEELKQFRQLHSKTPGHPEYGYTPGVETTTGPLGAGISNAVGMAIAERTLAAQFNRDGHEIVDHYTYCFLGDGCLME
GISHEACSLAGTLGLGKLIAFWDDNGISIDGHVEGWFTDDTPKRFEAYGWHVIANVDGHDSDAIRAAIEAAKAVTDKPTM
ICCKTIIGFGSPNKSGSHDCHGAPLGDAEIAAAREFLGWPHAPFEIPADVYAGWDAKEAGAAREAAWNDKFAAYAKAYPE
LAAEYERRVLKGELPADFEAKAQAFIQECQDKAEGIASRKASQNAIGAFGAMLPELLGGSADLAGSNLTLWSGSKGIQDD
PAGNYVYYGVREFGMSGIMNGVSLHGGFINYGATFMMFMEYARNAVRMSALMGIQNIFVYTHDSIGQGEDGPTHQPVEQL
ANLRMTPNMAVWRPCDAAETAVAWKAAIERRTAPTSLIFSRQNLKAQVRSAEQLANVAKGAYVLQDCAGTPELILIATGS
EVQLAMEAAAALTEQGKQVRVVSMPSNTEFDKQDAAYKESVLPRAVTKRVAIEAAHTDFWYKYVGFEGTVVGMTTFGESA
PGNVLLKHFGFTVENVLNAAKSLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 0.0 74
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 0.0 66