|
Name : Sput200_0650 (Sput200_0650) Accession : YP_006008600.1 Strain : Shewanella putrefaciens 200 Genome accession: NC_017566 Putative virulence/resistance : Virulence Product : arabinose-5-phosphate isomerase, KdsF Function : - COG functional category : - COG ID : - EC number : 5.3.1.13 Position : 745705 - 746682 bp Length : 978 bp Strand : - Note : SMART: CBS domain containing protein; TIGRFAM: KpsF/GutQ family protein; KEGG: shw:Sputw3181_3453 KpsF/GutQ family protein; PFAM: sugar isomerase (SIS); CBS domain containing protein DNA sequence : ATGGTAGACCAATCACAATTGCGCCAATGGGGCAGCAAAGTTATCGACATTGAAAAGTTAGCCCTCGATAATCTTTATCA ATATGTTGATTCTATTGAATTTGTACAGGCTTGCGAGTTAATTCTTAACTGCTCTGGCAAAGTTATTGTTATGGGAATGG GTAAATCAGGCCATATCGGCAATAAGATTTCAGCGACACTGGCAAGCACTGGTACTCCGGCATTTTTTGTGCATCCCGGA GAAGCGAGCCATGGGGACCTTGGTGTGCTCTCAGACAATGATATTATTCTCGCAATATCAAACTCGGGAGAATCCAGTGA AATCTTGGCCTTAATGCCCGTCATTCAACGAAAAGCTATCCCCGTGATTGCGATGACAGGTAAACCCGATTCAACGATGG CGCGTCTGGCCAAAATCCATTTATGTATAGAAGTGCCAGAAGAGGCCTGCCCGCTTGGGCTTGCCCCAACCTCCAGCACA ACGGCAACCCTCGTGATGGGTGATGCAATCGCTATTGCGCTACTACAAGCCAAAGGCTTTACTCGCGAAGATTTTGCCAT GTCGCATCCAGGTGGCGCACTGGGCCGAAAATTACTACTAAGAGTCCGCGATGTTATGCACAGCGGTAACGAGTTACCAC TTGTCAATCACGATATTTGTATCACCGAAGCCCTCTATGAAATATCCAAAAAAGGCTTAGGTATGACGGCGGTTATTGAT GAGCAGCATAAATTAGTGGGCATTTTCACCGATGGCGATTTACGTCGGGTGATTGATGCAGAAGTGAATCTACGTACAAC GCCAATTGCCGATGTGATGACTCGCAATTGCATCACAATTACCGATAGCGCACTTGCGGCTCAAGCACTACAAGTTATGG ATAGTAAAAATATTAATGGTTTAATCGTGATAAACAAAGATCACCATCCTATCGGAGCACTTAATATGCTCGATTTGGTT AAAGCAGGAGTTATTTAA Protein sequence : MVDQSQLRQWGSKVIDIEKLALDNLYQYVDSIEFVQACELILNCSGKVIVMGMGKSGHIGNKISATLASTGTPAFFVHPG EASHGDLGVLSDNDIILAISNSGESSEILALMPVIQRKAIPVIAMTGKPDSTMARLAKIHLCIEVPEEACPLGLAPTSST TATLVMGDAIAIALLQAKGFTREDFAMSHPGGALGRKLLLRVRDVMHSGNELPLVNHDICITEALYEISKKGLGMTAVID EQHKLVGIFTDGDLRRVIDAEVNLRTTPIADVMTRNCITITDSALAAQALQVMDSKNINGLIVINKDHHPIGALNMLDLV KAGVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 8e-55 | 44 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 6e-55 | 44 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 2e-54 | 44 |
