Gene Information

Name : Sput200_0629 (Sput200_0629)
Accession : YP_006008579.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Resistance
Product : acriflavin resistance protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 721519 - 724602 bp
Length : 3084 bp
Strand : -
Note : PFAM: acriflavin resistance protein; KEGG: shw:Sputw3181_3474 acriflavin resistance protein

DNA sequence :
ATGAATATTGCTGAATACTCCATTCGCCACAAAGTCATTAGCTGGATGTTTGTGTTACTCCTATTAATTGGTGGTGGCAT
CAGCTTTACGGGATTAGGGCAGTTAGAATTTCCCGAATTTACCATCAAAGAAGCCCTAGTGATCACGGCTTATCCCGGTG
CCTCGCCAGAACAAGTTGAAGAAGAAGTTACCCTACCGCTGGAAGATGCCCTACAACAACTCGATGCAGTCAAGCATGTG
ACCTCTATTAACAGTGCGGGTTTGTCACAAATCCAAATTGAGATCAAAGACAGTTACGATAAAACTAGCCTGCCACAGGT
TTGGGATGAAGTGCGCCGTAAGGTCAATGATACTGCGGGCCAATTACCTCCAGGCACAGGGACCCCACAAGTCATGGATG
ACTTTGGTGATGTATACGGGATTTTATTTAATCTTTCAGGGCCAGATTACAGCAACCGAGAACTGAGCAATTATGCCGAC
TATTTACGCCGTGAGTTAGTACTCGTGCCAGGGGTAAAAAAAGTTTCAGTTGTGGGCAGTATTACCGAGCAAGTGGTCAT
TGAAATATCTCAGCAAAAACTCTCGGCGCTAGGGTTAGATCAAAGCTATATCTATGGCCTTATCAATAATCAAAACGTGG
TCTCCAATGCAGGAAGCCTAGTGATTGGTGATAATCGAATCCGCATTCATCCCACTGGTGAATTTGGCAGTATTCAGGAT
CTCGCCCGCTTGATTGTCAGTCCACCCGGCAGCACGGAACTTATCTATTTAGGCGATATTGCCAATATCGCAAAGGATTA
TAACGAAACCCCGACAGTGCTTTACCACAACAAAGGCGAAGCTGCGCTATCCCTAGGCATTTCCTTTTCTAGCGGTGTAA
ACGTCGTCGAAGTCGGTCAAAGGGTGAGTGAGCGCCTCACCGAACTCGAATCCCAACGTCCGATTGGAATGAATTTAGAT
ACAGTCTACAACCAAAGTTCGGCGGTAGATGACACAGTTAATGGCTTTTTAATCAATCTATTAGAGTCAATTGCCATCGT
TATTGCCGTACTGTTGCTGTTTATGGGCTTACGTTCAGGCTTACTAATGGGGCTTATCCTGCTGTTAACCATCTTAGGGA
CTTTCATCGTAATGAAAGTGCTAGGTATTGAGCTACAGCTCATTTCACTCGGTGCGTTGATTATCGCCTTAGGTATGTTG
GTCGATAACGCGATTGTTGTCACCGAAGGCATTTTAATTGGCCTTCGCCGTGGCAAGACGCGCTTAGAAGCGGCAAAACA
AATTGTCTCCCAGACTCAATGGCCACTGTTAGGTGCAACCATTATTGCCATCATCGCCTTTGCGCCTATCGGATTATCGC
AAAATGCCTCTGGAGAATTTTGTCGCTCACTGTTCCAAGTGCTGATGATTTCATTATTTATCAGTTGGATCACCGCAATT
ACCCTCACCCCTTTCTTCTGTCATTTGTTGTTTAAAGATGCACCAAGTGATGACGAGCAAGATCCTTATAAGGGTTGGGT
TTTCAACTTATATCGAGCCAGTTTAACCCTAGCGCTGCGATTTAGAATTGTGAGCATACTGCTGGTTGGTGTGCTGTTAG
TGAGTGCCGTGATTGGCTTTGGTCATATTAAAAATGTGTTTTTTCCCGCATCCAATACGCCAATCTTTTTTGTGGATATT
TGGATGCCTGAAGGCACTGATATTAAAGCAACGGAGCGCTTTGCTGCTGATATTGAACAACAATTACTCAAACAAGCTGA
GCAACAGCATACTGGCCTGACCCACCTAACGACGGTAATAGGCCAAGGGGCGCAGCGTTTTATTCTGCCTTATCAGCCCG
AAAAAGGTTACCCCGCATTCGCCCAGTTGATTGTAGAAATGCAGGATCTTGAGGCGGTGAAAAACTATATGCCTGAACTG
GAGCGGTTTTTAAATCAACGCTTCCCACAGGCACAATATCGCCTAAAAAATATGGAAAATGGTCCATCCTCCGCAGCCAA
AATTGAGGCTCGTTTCTATGGTGATGATCCTGAAGTCCTAAGAGCATTAGGTGCCCAAGTCGAAGCTATTTTCTACGCAG
AGCCAAGCATGGATGGTATACGCCACGACTGGCGTAACCAAGTCCCGTTAGTTCGTCCGCAATTGGAAAATGCCCAAGCA
CGGGAAACGGGGATCAGTAAACAAGATCTCGACAATGCACTGCTGGTTAACTTTAGCGGTAAACAAATTGGTTTATATCG
AGAAACCAGCCACTTGTTGCCGATAGTCGCAAGAGCACCCGCCGAGGAGCGCTTGCAAGCTGATAGTCTCTGGAAACTAC
AAATTTGGAGTAGTGAACACAGCACCTTTGTACCAGCAACTCAAGTTGTCAGTAACTTCAATACCGAATGGGAAAATCCA
CTGGTGATGCGCCGTGACCGTATGCGCATGCTTGCTGTCTTGGCAGATCCTAAATTAGGCAGCGATGAAACGGCGGACTC
TGTGCTACGTAAGGTCAAAGATAAGGTTGAAGCTATCGCCTTACCCGCTGGCTACCACCTCGAATGGGGCGGCGAATATG
AAACCGCAGGTGAAGCGCAAACAGCGGTGTTTAGCTCAATTCCGCTGGGTTACCTTGCCATGTTTTTAATTACAGTATTC
CTATTCAACTCTGTGCGTCAGCCATTGGTTATTTGGTTTACTGTACCACTCGCATTGATTGGGGTTTCGGCGGGACTCTT
GTTGTTCGATGCGCCCTTCAGCTTTATGGCACTGCTTGGCCTATTGAGCTTATCGGGCATGGTGATCAAAAACGGCATTG
TGTTGGTCGATCAAATCAACCTTGAACTAAGTGAAGGTAAAGCGGCCTATAGTGCATTGTTGGATTCCTGCGTCAGCCGT
GTTCGCCCTGTCATGATGGCGGCGATAACCACAATGCTTGGAATGATCCCCTTAATTTCAGATGCATTTTTTGGTTCGAT
GGCCATAACCATTATCTTTGGCTTAGGCTTCGCTTCTGTGCTGACATTAATTGTCCTGCCAGTCATGTATAGCTTGGCCT
TTAATATCAAACCGACACTAATAGGAGGTCAATCACGTAACTAA

Protein sequence :
MNIAEYSIRHKVISWMFVLLLLIGGGISFTGLGQLEFPEFTIKEALVITAYPGASPEQVEEEVTLPLEDALQQLDAVKHV
TSINSAGLSQIQIEIKDSYDKTSLPQVWDEVRRKVNDTAGQLPPGTGTPQVMDDFGDVYGILFNLSGPDYSNRELSNYAD
YLRRELVLVPGVKKVSVVGSITEQVVIEISQQKLSALGLDQSYIYGLINNQNVVSNAGSLVIGDNRIRIHPTGEFGSIQD
LARLIVSPPGSTELIYLGDIANIAKDYNETPTVLYHNKGEAALSLGISFSSGVNVVEVGQRVSERLTELESQRPIGMNLD
TVYNQSSAVDDTVNGFLINLLESIAIVIAVLLLFMGLRSGLLMGLILLLTILGTFIVMKVLGIELQLISLGALIIALGML
VDNAIVVTEGILIGLRRGKTRLEAAKQIVSQTQWPLLGATIIAIIAFAPIGLSQNASGEFCRSLFQVLMISLFISWITAI
TLTPFFCHLLFKDAPSDDEQDPYKGWVFNLYRASLTLALRFRIVSILLVGVLLVSAVIGFGHIKNVFFPASNTPIFFVDI
WMPEGTDIKATERFAADIEQQLLKQAEQQHTGLTHLTTVIGQGAQRFILPYQPEKGYPAFAQLIVEMQDLEAVKNYMPEL
ERFLNQRFPQAQYRLKNMENGPSSAAKIEARFYGDDPEVLRALGAQVEAIFYAEPSMDGIRHDWRNQVPLVRPQLENAQA
RETGISKQDLDNALLVNFSGKQIGLYRETSHLLPIVARAPAEERLQADSLWKLQIWSSEHSTFVPATQVVSNFNTEWENP
LVMRRDRMRMLAVLADPKLGSDETADSVLRKVKDKVEAIALPAGYHLEWGGEYETAGEAQTAVFSSIPLGYLAMFLITVF
LFNSVRQPLVIWFTVPLALIGVSAGLLLFDAPFSFMALLGLLSLSGMVIKNGIVLVDQINLELSEGKAAYSALLDSCVSR
VRPVMMAAITTMLGMIPLISDAFFGSMAITIIFGLGFASVLTLIVLPVMYSLAFNIKPTLIGGQSRN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1355 YP_001217299.1 AcrB/AcrD/AcrF family transporter Not tested VPI-2 Protein 2e-172 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sput200_0629 YP_006008579.1 acriflavin resistance protein BAC0519 Protein 0.0 55
Sput200_0629 YP_006008579.1 acriflavin resistance protein BAC0428 Protein 0.0 54
Sput200_0629 YP_006008579.1 acriflavin resistance protein BAC0526 Protein 0.0 53
Sput200_0629 YP_006008579.1 acriflavin resistance protein BAC0425 Protein 9e-173 42