Gene Information

Name : Sput200_0597 (Sput200_0597)
Accession : YP_006008547.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Virulence
Product : two component response regulator for tetrathionate reductase regulon, TtrR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 681554 - 682165 bp
Length : 612 bp
Strand : +
Note : KEGG: shw:Sputw3181_3508 response regulator receiver protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR

DNA sequence : 
ATGAGTCTTGCCTTACCTGTGTATTTAATCGATGACGATGACTCAGTGCGTCGTTCTTTGCGTTTTATGCTTGAAAGTTA
TGGCCTTAAGATCACCGACTTTGATAGCGCTGAAGCCTTTTTTACCGCCGTAGACTTAACACTACCGGGTTGTGCGCTAG
TCGATGTGCGTATGCCGGGTTTGAGTGGTCAGCAGTTGCATCTTGAATTAGTGGCAAAAAATAGTCCGCTAGCGGTGATT
TATCTCACTGGCCATGGCGATGTGCCAATGGCGGTAGATGCGCTTAAATTAGGTGCGGTGGATTTTTTCCAAAAGCCCGC
CGATGGCGCTAAGTTAGCCGAGGCGGTTGTCAAAGCGTTGGAACATACCAAGGCGCATCATCAAGACAATCAGTATCTTG
AGACTTATCAAGCGCTCACGCCAAGGGAGCGGGAAATACTCAACCTGATTGCCCAAGGCCTGAAGAACCAAGAGATCGCC
GATAGTCTCTGTATTGCCATGCGCACGGTTGAGATCCACCGCGCCAATTTGATGAAAGGCATGCAAGTGGGATCGCTGGC
GGAAATGATGCTGATTTACAGTCGGATCGCCGAACGCCTGCGTCTCGAATAA

Protein sequence : 
MSLALPVYLIDDDDSVRRSLRFMLESYGLKITDFDSAEAFFTAVDLTLPGCALVDVRMPGLSGQQLHLELVAKNSPLAVI
YLTGHGDVPMAVDALKLGAVDFFQKPADGAKLAEAVVKALEHTKAHHQDNQYLETYQALTPREREILNLIAQGLKNQEIA
DSLCIAMRTVEIHRANLMKGMQVGSLAEMMLIYSRIAERLRLE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 3e-33 45
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 3e-33 45
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 3e-33 45
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 2e-33 45
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 2e-33 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sput200_0597 YP_006008547.1 two component response regulator for tetrathionate reductase regulon, TtrR VFG0488 Protein 6e-34 45