Gene Information

Name : Sput200_0547 (Sput200_0547)
Accession : YP_006008497.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Resistance
Product : O-succinylhomoserine (thiol)-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 615344 - 616507 bp
Length : 1164 bp
Strand : +
Note : KEGG: shw:Sputw3181_3554 O-succinylhomoserine (thiol)-lyase; TIGRFAM: O-succinylhomoserine (thiol)-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein

DNA sequence : 
ATGACAGAGCGTCAATTAGCCACACTGGCAGTGCGTCAGGGTATCGAAAGCGATACTCAGTATGGTGCCGTTGTGCCACC
GATTTATTTGTCGACTAATTACGCCTTCGATGGTCATAACAATCCCCGCGAATTCGATTACAGTCGTTCAGGCAACCCAA
CGCGCTGTATTTTAGGCGAAGCATTAGCCCAATTAGAAAAGGGGGCGACTGGTATAGTGACATGCACTGGCATGGCGGCC
ATCACCTTAGTGACCACCTTACTCGGCCCAGATGATCTCTTGGTTGTGCCCCACGATTGTTACGGCGGTTCCTACCGTTT
ATTTACTAACTTGGCGAAGAAAGGCCAGTTTAAGCTGATTGTGGTGGATCAAACTGACAGTCAAGCGTTAGCCGCAGCCA
TAGCGCAGAATCCTAAGATGGTGTGGCTCGAAACCCCGTCGAACCCGTTATTGCGTGTGGTGGATATCGAAGCGATTGCT
AAGGCGAGCCATAATGTCGGCGCGCTGGTGGTGGTCGATAACACCTTTTTATCGCCGATATTGCAACAACCCCTATTGTT
AGGCGCGGATATCGTTATCCACTCCACCACTAAATATATCAATGGTCACAGCGATGTGGTCGGCGGCGCTGTGGTCGCCA
AAGATGCACAAATCGGCGAAAGCTTACATTGGTGGTCGAACACTCTAGGCTTAACGGGGTCAGCCTTCGACAGTTATCTG
ACCCTGCGCGGCCTACGTACTCTAGCGGTACGCATTCGCGAACATCAAGCCAATGCCCAGCGCATTGTTGAGGTATTAAC
CCAAAGCCCTGTGGTGAGCAAAGTCTATTACCCTGGTCTTGCGGATCACCCTGGTCACGCCATTGCGGCCAAGCAGCAAA
AAGGCTTTGGCGCTATGCTGAGCTTTGAGCTCAAAGGCGGCGAGACCGAAGTGGTGGCCTTTTTAGGTGCATTAAGTTTA
TTTAGCGTGGCAGAAAGTTTAGGTGGCGTCGAAAGTTTAGTGGCCGTGCCCGCCACTATGACCCACAGAGCCATGGAGCC
GCAGGCGCGCTTCGAGGCTGGTATTAAAGACACCCTATTGCGTCTATCGGTGGGTATTGAAGATGCCGCCGATTTAGTTG
CAGATATTCAAGCAGGATTAGCCGCCGCTGCGGCTTGTCAGTAG

Protein sequence : 
MTERQLATLAVRQGIESDTQYGAVVPPIYLSTNYAFDGHNNPREFDYSRSGNPTRCILGEALAQLEKGATGIVTCTGMAA
ITLVTTLLGPDDLLVVPHDCYGGSYRLFTNLAKKGQFKLIVVDQTDSQALAAAIAQNPKMVWLETPSNPLLRVVDIEAIA
KASHNVGALVVVDNTFLSPILQQPLLLGADIVIHSTTKYINGHSDVVGGAVVAKDAQIGESLHWWSNTLGLTGSAFDSYL
TLRGLRTLAVRIREHQANAQRIVEVLTQSPVVSKVYYPGLADHPGHAIAAKQQKGFGAMLSFELKGGETEVVAFLGALSL
FSVAESLGGVESLVAVPATMTHRAMEPQARFEAGIKDTLLRLSVGIEDAADLVADIQAGLAAAAACQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 3e-58 41
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-59 41
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-51 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sput200_0547 YP_006008497.1 O-succinylhomoserine (thiol)-lyase BAC0207 Protein 2e-51 41