Gene Information

Name : Sput200_0457 (Sput200_0457)
Accession : YP_006008409.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Virulence
Product : two component transciptional regulator for thiosulfate/tetrathionate response, TtrR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 508045 - 508647 bp
Length : 603 bp
Strand : -
Note : KEGG: shw:Sputw3181_3638 response regulator receiver protein; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR

DNA sequence : 
ATGCTCACTAAGCTGCCCCTTTATCTTGTCGATGACGATGACGCCATTTTAGATTCACTTGGCTTTATGCTCAGGCAATT
TGGCTACCAAGTACAAACCTTTAATAATGGTCGAGACTTTCTCGAACAGTGCCCACTATCTGAGGCTGGCTGCGTAATTT
TAGATAGCAGAATGCCTGAAATTACGGGCCAAGAAGTACAGCAAAAACTGATAGAAACCCACAGTCCACTAGGCGTGATA
TTTCTCACAGGTCACGGTGATTTACCTATGGCATTGAGTGCTTTTCGTAAAGGGGCCTGCGACTTTTTTCAAAAACCCGT
ATCGGGCAAAGCATTAGTACAAGCCATTGAAAAGGCTCAGTGCGAGAGCCTCGCAACCTTTGAAAAGCAGAGCTTACAAC
ATAAGTTTGACCAACTCACCGAACGCGAACAGCAAGTGTTAGCCCATGTAATCCAAGGCATGACTAACAAGCAAATCTCG
GAGGCAATGTTTTTATCCCTACGCACGATTGAAGTTCACCGTGCAAAAATCATGAAAAAACTTGAAGTAAACAATATGGC
AGAGCTAGTACAGCACTTAGGGAGCCTTAATTCTGTTCTATAA

Protein sequence : 
MLTKLPLYLVDDDDAILDSLGFMLRQFGYQVQTFNNGRDFLEQCPLSEAGCVILDSRMPEITGQEVQQKLIETHSPLGVI
FLTGHGDLPMALSAFRKGACDFFQKPVSGKALVQAIEKAQCESLATFEKQSLQHKFDQLTEREQQVLAHVIQGMTNKQIS
EAMFLSLRTIEVHRAKIMKKLEVNNMAELVQHLGSLNSVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ttrR CAB37412.1 TtrR Virulence SPI-2 Protein 2e-35 42
ttrR YP_216395.1 tetrathionate reductase complex: response regulator Virulence SPI-2 Protein 3e-35 42
ttrR NP_456141.1 putative two-component response regulator Not tested SPI-2 Protein 3e-35 42
ttrR NP_805058.1 two-component response regulator Virulence SPI-2 Protein 3e-35 42
ttrR NP_460352.2 response regulator Virulence SPI-2 Protein 3e-35 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sput200_0457 YP_006008409.1 two component transciptional regulator for thiosulfate/tetrathionate response, TtrR VFG0488 Protein 8e-36 42