Gene Information

Name : Sput200_4328 (Sput200_4328)
Accession : YP_006012131.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Unknown
Product : integrase family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4834721 - 4835890 bp
Length : 1170 bp
Strand : -
Note : PFAM: integrase family protein; KEGG: seh:SeHA_C1600 phage integrase family protein

DNA sequence :
ATGAAAATCAGCATACATAAACGAGATCCAGATAAAAATGGCCTGCGAGCTATCAGGCTTGTTTACTATTATGGTTCAAA
GACCTCGGAAGACGGCTCAAGAGCTCAGAAACGCTCATACGAGACGTTAAATCTGTTCCTCTACAACAAGCCAAAAAACG
CAGTTGAGCGTGAGCACAACAAAACCACATTGCAAAAAGCCGAGGCCATTCGCGCCAAACGCCTGCTAGAAATGGAATCT
GCCAAACATGGATTGGATGACCGCACCAAACTCAATGCCAGCTTCTTTGACTACTTCGAGCAAATAGCAGCAAGTAAAGC
ATCCGGTAGTAAATCCAATTACTCAATTTGGATTTCAGCGGGCATCCATCTACACCGTTATCACCGCCACGCAGAACTCA
CTTTTGAACAGGTAGATAAATACTTCTTGGAAGGGTTCCGCCATTACCTACAGCATGAGGCAATAACAAAATCAGATACC
GGTCTCTCCAGAAATACCGCCTGTAGCTATTTCAATAAAATCCGGGCAGCACTCAACCAAGCGCAACGAGACCGAATCAT
CAGAGATAACCCTGTTGAACAAGTCAAATCCATCAAAGCAGAAAGGACACAGCGCACTTATCTCACTCTGGATGAGGTAA
AGGCCCTTACCAAGGCAGAATGCCGTTACGATGTACTACGAAGAGCATTTCTGTTCTCCTGCACGACAGGACTACGCTGG
TCAGACATTCATAAACTGGTGTGGGGTGAAATTGAACTATTTGCTCAAGGGCACTACCGAATCATATTTTCCCAGATAAA
GCTCAAAAACTCGGGCAATGGCCTGCAATATCTCGATTTACCGGATTCTGCGGTGCGTCTACTCAACTTGGAGAACAAGG
GGAAACCAACTGAACGGGTTTTTAAGGGTTTACGTTACGACAGTTACAGCAACGTGGCGCTAGTGCAGTGGGCTATACGT
GCCGGGATAACCAAACACGTGACCTTTCATGCTGGCCGACACACCTTTGCTGTAAACCAGCTTGCCCGTGGCTTGGACAT
CTATTCCCTGTCCAGATTGCTTGGCCACAGCGAACTCAGAACAACAGAAATCTACGCAGATATTCTGGAAACCCGCCGCA
CAGAGGCCATGCGGACCTTTCCTGATATCTTCGATGATTCATCAGACTAA

Protein sequence :
MKISIHKRDPDKNGLRAIRLVYYYGSKTSEDGSRAQKRSYETLNLFLYNKPKNAVEREHNKTTLQKAEAIRAKRLLEMES
AKHGLDDRTKLNASFFDYFEQIAASKASGSKSNYSIWISAGIHLHRYHRHAELTFEQVDKYFLEGFRHYLQHEAITKSDT
GLSRNTACSYFNKIRAALNQAQRDRIIRDNPVEQVKSIKAERTQRTYLTLDEVKALTKAECRYDVLRRAFLFSCTTGLRW
SDIHKLVWGEIELFAQGHYRIIFSQIKLKNSGNGLQYLDLPDSAVRLLNLENKGKPTERVFKGLRYDSYSNVALVQWAIR
AGITKHVTFHAGRHTFAVNQLARGLDIYSLSRLLGHSELRTTEIYADILETRRTEAMRTFPDIFDDSSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
int AGF35038.1 integrase Not tested SGI1 Protein 8e-133 68
int AGK06906.1 integrase Not tested SGI1 Protein 8e-133 68
int AGK06943.1 integrase Not tested SGI1 Protein 8e-133 68
int AGK06989.1 integrase Not tested SGI1 Protein 8e-133 68
int AAG03003.1 integrase Not tested SGI1 Protein 8e-133 68
int AGK07047.1 integrase Not tested SGI1 Protein 8e-133 68
int ACX47954.1 integrase Not tested SGI1 Protein 8e-133 68
int ACS32045.1 integrase Not tested SGI2 Protein 8e-133 68
int AGF34959.1 integrase Not tested SGI1 Protein 8e-133 68
int AGF34999.1 integrase Not tested SGI1 Protein 8e-133 68