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Name : Sput200_0392 (Sput200_0392) Accession : YP_006008345.1 Strain : Shewanella putrefaciens 200 Genome accession: NC_017566 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 428407 - 429972 bp Length : 1566 bp Strand : + Note : TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; KEGG: shw:Sputw3181_3703 general secretory pathway protein E; SMART: AAA ATPase DNA sequence : ATGAGTGAAATTCAATTATCCCAAGTCGATGACTTAAGCCTAGCGTCTAATGAACTAGGCTTAGATACCGAAGGTGATGA GGTCTTTCGCTCCAATAGCAAAGAGCGTTTACCCTTTGCCTTTGCCCACCGTCACGAGGTGATTTTGGCCTATGGTGATA CAGACGAATTAAGTCTGTTCCATACCGCTAAAACACCACTTGCCGCCATGCTTGAAGCACGGCGTTATTCGGGAGTTGAT TTGCCCTTAGTGCAACTTGAGGCGGGTAGATTTGAGGCCAAATTGACTCAGGTCTATCAGGCTAATTCCTCCGAGGCGCA GCAACTGATGGAAGATATTGGCAACGAGATGGATTTATTCACTCTTGCTGAAGAGTTACCTCAGACCGAAGATTTACTTG AAGGTGATGATGACGCGCCTATCATCAAACTGATTAATGCCTTGTTATCCGAAGCGATTAAAGAAGAAGCCTCAGATATT CATATCGAAACCTATGAGAAGCAGTTAATCGTACGTTTTCGTGTTGATGGTGTGCTTAAAGAAGTGCTTAAACCCAACCG TAAACTGTCGTCACTGTTAGTGTCGCGGATTAAGGTGATGGCGCGCCTCGATATTGCTGAAAAGCGTGTACCACAAGATG GTCGTATCTCATTGCGTATTGCGGGACGTGCCGTTGATGTACGGGTGTCGACCATGCCATCGAGCCATGGTGAGCGTGTC GTGCTGCGTTTGCTTGATAAAAATGCGGGTAATCTTGATTTAAAACAACTGGGGATGACAGACGGTATTCGCGTTAAATT TGAAGAGCTTATCCGTCGTCCACACGGTATTATCTTAGTGACGGGTCCTACTGGTTCAGGTAAAAGTACCACGCTGTACG CAGGTTTAACTGAGATTAACTCCAAAGACACCAACATTCTCACTGTTGAAGATCCTATCGAATATGAGTTAGAAGGCATA GGCCAGACCCAAGTTAACACTAAGGCAGATATGACTTTTGCCCGTGGTCTAAGGGCGATTTTACGTCAAGATCCAGACGT GGTGATGATTGGTGAGATCCGCGATCTCGAAACCGCCCAAATTGCGGTACAGGCGTCACTCACGGGTCATATGGTGATTT CAACCCTGCATACTAACACCGCCTCTGGCGCTATTACCCGTTTGCAAGATATGGGTGTCGAGCCTTTCCTCGTCTCATCG AGTTTGCTTGGTGTGTTAGCTCAGCGTTTGATCCGAACTCTGTGCCCTAAATGTAAGATTGAGCATGTTCCCGATGAACG TGAACGTGAATTACTGGGCATTGCCGCAGATGATAACCGACACATCTTCCGTGCCAATGGCTGTAAGGCTTGTGGCGAAA GCGGTTATCGCGGTCGTACGGGGATCCACGAATTACTGCTGGTGGATGATAATGTGCGCGAGCTTATCCATGGTGGTCGA GGTGAGTTGGCGATTGAAAAATACATTCGCCAGTTCGTACCCAGTATTCGCCATGATGGCATGAGTAAGGTGCTCATGGG CATCACTACACTTGAAGAAGTGCTAAGGGTGACCCGCGAGGAGTAA Protein sequence : MSEIQLSQVDDLSLASNELGLDTEGDEVFRSNSKERLPFAFAHRHEVILAYGDTDELSLFHTAKTPLAAMLEARRYSGVD LPLVQLEAGRFEAKLTQVYQANSSEAQQLMEDIGNEMDLFTLAEELPQTEDLLEGDDDAPIIKLINALLSEAIKEEASDI HIETYEKQLIVRFRVDGVLKEVLKPNRKLSSLLVSRIKVMARLDIAEKRVPQDGRISLRIAGRAVDVRVSTMPSSHGERV VLRLLDKNAGNLDLKQLGMTDGIRVKFEELIRRPHGIILVTGPTGSGKSTTLYAGLTEINSKDTNILTVEDPIEYELEGI GQTQVNTKADMTFARGLRAILRQDPDVVMIGEIRDLETAQIAVQASLTGHMVISTLHTNTASGAITRLQDMGVEPFLVSS SLLGVLAQRLIRTLCPKCKIEHVPDERERELLGIAADDNRHIFRANGCKACGESGYRGRTGIHELLLVDDNVRELIHGGR GELAIEKYIRQFVPSIRHDGMSKVLMGITTLEEVLRVTREE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 8e-152 | 63 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-152 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sput200_0392 | YP_006008345.1 | general secretory pathway protein E | VFG0182 | Protein | 2e-149 | 64 |
| Sput200_0392 | YP_006008345.1 | general secretory pathway protein E | VFG2048 | Protein | 4e-152 | 63 |
| Sput200_0392 | YP_006008345.1 | general secretory pathway protein E | VFG1876 | Protein | 3e-137 | 57 |
| Sput200_0392 | YP_006008345.1 | general secretory pathway protein E | VFG2426 | Protein | 9e-77 | 46 |
| Sput200_0392 | YP_006008345.1 | general secretory pathway protein E | VFG0112 | Protein | 1e-83 | 46 |
| Sput200_0392 | YP_006008345.1 | general secretory pathway protein E | VFG1880 | Protein | 2e-84 | 43 |
