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Name : Sput200_0391 (Sput200_0391) Accession : YP_006008344.1 Strain : Shewanella putrefaciens 200 Genome accession: NC_017566 Putative virulence/resistance : Virulence Product : general secretion pathway protein D Function : - COG functional category : - COG ID : - EC number : - Position : 426297 - 428414 bp Length : 2118 bp Strand : + Note : KEGG: shw:Sputw3181_3704 general secretion pathway protein D; TIGRFAM: general secretion pathway protein D; PFAM: type II and III secretion system protein; NolW domain protein DNA sequence : ATGAATAATAAAAGGATTCGACGCAAACTGATTGCTGGAGTTGTGGCGGGCGCTGCCATGTTTACCTCCCAATTTGTTTG GTCAGAACAGTATGCGGCCAACTTCAAGGGCACTGATATTCAAGAGTTTATCAACATTGTTGGTAAAAATTTGAATAAGA CCATCATTGTTGACCCAACGATCCGTGGCAAAATTAACGTACGCAGTTATGACCTGCTGAATGACGAACAGTATTACCAG TTCTTCCTTAACGTGTTGCAAGTTTATGGTTATGCCATTGTCGAGATGGAAAATGGCGTGATTAAGGTTGTTAAAGACAA AAGCGCCCAGACGGGGGCAATCCGTGTCGCGAACGATAATGATCCCGGCATTGGCGATGAAATGGTTACCCGTATTGTGG CCTTGTATAACACTGAGGCTAAGCAACTCGCTCCCCTGTTACGCCAGCTAAATGATAACGCTGGTGGTGGCAACGTCGTC AACTACGATCCTTCCAACGTACTTATGCTGACGGGCCGAGCCTCTGTGGTTAACAAGCTGGTGGAAATTATCCGCCGTGT TGATAAACAAGGGGATACATCGGTACAAGTGGTGCCGCTAGAGTACGCATCAGCGGGTGAAATGGTGCGAATTATCGATA CCCTTTACCGTGCAAGCGCAAACCAAGCGCAGTTACCCGGTCAAGCACCCAAAGTGGTGGCCGATGAGCGTATTAACGCT GTCATCGTTAGTGGTGATGAAAAGAGCCGTCAGCGGGTGGTTGAGCTCATTCATCGTCTCGATGCGGAGCAAGCCAGCAC AGGAAACACTAAGGTACGTTATTTACGCTACGCCAAAGCGGAAGATTTGGTTGAAGTGTTAACGGGTTTTGCCCAAAAAC TGGAAAGTGAAAAAGATCCAAGTGCGCAGGCGGGTGCGAAACGTCGTAATGAAATCAACATTATGGCTCACACAGATACA AACGCTTTAGTGATCAGCGCCGAGCCGGATCAAATGCGTACTATTGAGAGCGTGATTAACCAGCTCGATATTCGCCGTGC TCAAGTATTGGTCGAAGCCATTATCGTCGAAGTTGCTGAGGGCGATAATGTCGGTTTTGGCGTGCAATGGGCTGCTAAAG CGGGTGGTGGTACTCAGTTTAATAACTTAGGCCCAACCATAGGTGAGATTGGCGCAGGGATTTGGCAAGCACAGGATAAA GAAGGTGATACTGTTACTACCCTTGACGGTAATGGTAATCCTGTAACAACTAAAAATCCTGATACCAGAGGTGATGTCAC CTTACTTGCCCAAGCTTTAGGTAAGGTCAATGGTATGGCTTGGGGTGTGGCCATGGGGGACTTTGGTGCCTTAATTCAAG CCGTGTCGAGTGATACTAATTCTAACGTATTGGCAACACCTTCGATTACCACCTTAGATAACCAAGAAGCCTCATTCATC GTGGGTGATGAAGTGCCTATTTTGACAGGGTCTACCGCCAGTTCAAATAACAGTAACCCATTCCAAACCGTTGAACGTAA AGAGGTTGGGGTTAAGTTAAAAGTGGTGCCACAAATCAATGAGGGCAATGCGGTTAAGCTGGCGATTGAACAAGAAGTGT CAGGCGTTAATGGTAACACGGGTGTGGATATTTCCTTTGCGACTCGCCGTCTAACCACCACTGTTATGGCTGACTCTGGG CAAATTGTGGTACTCGGGGGTTTGATTAACGAAGAAGTGCAGGAAAGTGTGCAAAAAGTACCTTTCCTTGGTGATATACC CGTGCTTGGGCATTTATTCAAATCTTCCTCCAGTAAAAAGACGAAGAAAAACCTGATGATCTTTATCAAGCCAACCATTA TTCGTGATGGTATGACAATGGAAGGGATTGCTGGGCGTAAATACAACTATTTCAGAGCGTTACAACTTGAGCAACAAAAG CGTGGCGTTAACTTAATGCCGGATACTCAAGTCCCTGTATTGGATGAATGGAATCAATCTGAGTATCTACCGCCGGAAGT GAACGATATTTTAGAGCGTTACAAAGATGGCAGAGGCCTAGACACCCAGATGCGCAAAACGGATTCAACGCTCAAAACGC TGGATGAAAACAAAAATAAAGATAAAACCAATGAGTGA Protein sequence : MNNKRIRRKLIAGVVAGAAMFTSQFVWSEQYAANFKGTDIQEFINIVGKNLNKTIIVDPTIRGKINVRSYDLLNDEQYYQ FFLNVLQVYGYAIVEMENGVIKVVKDKSAQTGAIRVANDNDPGIGDEMVTRIVALYNTEAKQLAPLLRQLNDNAGGGNVV NYDPSNVLMLTGRASVVNKLVEIIRRVDKQGDTSVQVVPLEYASAGEMVRIIDTLYRASANQAQLPGQAPKVVADERINA VIVSGDEKSRQRVVELIHRLDAEQASTGNTKVRYLRYAKAEDLVEVLTGFAQKLESEKDPSAQAGAKRRNEINIMAHTDT NALVISAEPDQMRTIESVINQLDIRRAQVLVEAIIVEVAEGDNVGFGVQWAAKAGGGTQFNNLGPTIGEIGAGIWQAQDK EGDTVTTLDGNGNPVTTKNPDTRGDVTLLAQALGKVNGMAWGVAMGDFGALIQAVSSDTNSNVLATPSITTLDNQEASFI VGDEVPILTGSTASSNNSNPFQTVERKEVGVKLKVVPQINEGNAVKLAIEQEVSGVNGNTGVDISFATRRLTTTVMADSG QIVVLGGLINEEVQESVQKVPFLGDIPVLGHLFKSSSSKKTKKNLMIFIKPTIIRDGMTMEGIAGRKYNYFRALQLEQQK RGVNLMPDTQVPVLDEWNQSEYLPPEVNDILERYKDGRGLDTQMRKTDSTLKTLDENKNKDKTNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 6e-147 | 53 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 3e-155 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sput200_0391 | YP_006008344.1 | general secretion pathway protein D | VFG2047 | Protein | 1e-145 | 53 |
