Gene Information

Name : Sput200_3920 (Sput200_3920)
Accession : YP_006011750.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Resistance
Product : cation efflux protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4390409 - 4391314 bp
Length : 906 bp
Strand : +
Note : PFAM: cation efflux protein; KEGG: shw:Sputw3181_1169 cation efflux system permease, putative

DNA sequence :
ATGAATGCAAAATGCTGTTCCAATGATAAGTGTAGCGAAACGGGCAACAGTGAAAATAGCGCCGTTGATGCACCTGATAA
GCATGCAAAATATGCCTACCTTAGTGAATTTAGGGTGCCTAAAATGGACTGCCCTGCCGAAGAGCGTTTGATCCGTATGG
CGATGGAAACAGTTGAGCCCGGTGTTCTGTTACAGTTTGATATCCGACAAAGGCAGGTTCGCGTTTTTCACACGGTGAAT
GCCAATGAAATTACACCAAAAATGCACAGCTTAGGGCTGGGCGCATCGCTGACAAAGACCGGGCCGGTGAAACCCGAAGA
GGTAACGCAGGCCAGACAATCCACAGCATCAGGTTCGCTGCGTGAGGAGTTAATTTTAAAATGGTTGCTGGGCATTAACG
CGGTGATGTTTGCAGTAGAGTTTGTGACCGGTTGGCTGGCTCAATCAACCGGGTTAATAGCCGACTCTTTGGATATGTTT
GCCGATGCAGCGGTATACGGGGTTGCGCTATACGCAGTCGGGCGTAGTAGCAAGGTTCAATTAAACGCCGCACAGCTTGC
CGGCTGGCTGCAATTAATTTTAGCTTTTGGGGTGATCAGTGAGGTGATACGGCGCTACCTGTTTGGTAACGAGCCAGTGT
CGACGTTGATGTTAATTATGGGCGCTATTGCTTTGGTTGCTAATGTGATCTGTCTTTCGTTAATTCATCAACAAAAAGAA
AGCGGCGCGCATATGAAAGCCAGTTGGATTTTCTCTGCAAATGACGTTATCGCAAATGCTGGGGTGATTTTGGCCGGATT
ATTAGTCACCTGGACCGGGTCACGCTATCCGGATCTGGTAATAGGGTTCATCATTGGATTAGTTGTACTCAATGGTGCGC
GCAGGATTTTACAGCTAAAAGCGTAG

Protein sequence :
MNAKCCSNDKCSETGNSENSAVDAPDKHAKYAYLSEFRVPKMDCPAEERLIRMAMETVEPGVLLQFDIRQRQVRVFHTVN
ANEITPKMHSLGLGASLTKTGPVKPEEVTQARQSTASGSLREELILKWLLGINAVMFAVEFVTGWLAQSTGLIADSLDMF
ADAAVYGVALYAVGRSSKVQLNAAQLAGWLQLILAFGVISEVIRRYLFGNEPVSTLMLIMGAIALVANVICLSLIHQQKE
SGAHMKASWIFSANDVIANAGVILAGLLVTWTGSRYPDLVIGFIIGLVVLNGARRILQLKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
1_43 CAJ77022.1 Heavy metal detoxification protein Not tested AbaR1 Protein 4e-64 53
1_376 CAJ77095.1 Heavy metal detoxification protein Not tested AbaR1 Protein 4e-64 53
cadA ADZ05770.1 Co/Zn/Cd efflux system component Not tested AbaR11 Protein 4e-64 53
cadA AGK36654.1 Co/Zn/Cd efflux system component Not tested AbaR26 Protein 4e-64 53
ACICU_00235 YP_001844894.1 heavy metal detoxification protein Not tested AbaR20 Protein 5e-64 53
cadA ACN81030.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 5e-64 53
cadA ACS32042.1 Co/Zn/Cd efflux system component Not tested AbaR5 Protein 5e-64 53