Gene Information

Name : Sput200_3919 (Sput200_3919)
Accession : YP_006011749.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4389922 - 4390332 bp
Length : 411 bp
Strand : -
Note : TIGRFAM: Cd(II)/Pb(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: shw:Sputw3181_1170 MerR family transcriptional regulator; SMART: regulatory protein MerR

DNA sequence : 
ATGATCAAGATTGGAGAGCTGGCAAAAATCTCTGGCTGTTCTGTGCAAACCATCCGTCACTATGAAAAGGAGCAGCTTCT
TGCGGCGAAATTACGTAGCGATGGTAATTTCCGCCTCTACGATCACGCTGATATCGAGCGGTTGCTATTTATTAAACACT
GCCGGAGTTTAGATCTGAGTTTGGCAGAAATTCGTCAGTTACTGAGTTTGAATGACTCGCCAATGTCGCAGTGTGATGAT
GTTAATCAGATGATTGAACAGCATATCGAGCAGGTAGAACGTCGCATTGCGGATTTAACGCAGCTTAATAAACAACTAAA
GGCTTTACGTCTTAGCTGCAACTTGAAGCGCACGGTAGAGCACTGTGGTATTTTAAAACAATTGAATGAAGCCGTTAGTC
AAACCAACTAA

Protein sequence : 
MIKIGELAKISGCSVQTIRHYEKEQLLAAKLRSDGNFRLYDHADIERLLFIKHCRSLDLSLAEIRQLLSLNDSPMSQCDD
VNQMIEQHIEQVERRIADLTQLNKQLKALRLSCNLKRTVEHCGILKQLNEAVSQTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 1e-31 50
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 3e-26 44
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 6e-26 44
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 9e-26 44
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 3e-26 44
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 6e-26 44
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 2e-26 44
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 2e-26 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sput200_3919 YP_006011749.1 MerR family transcriptional regulator BAC0058 Protein 9e-33 53
Sput200_3919 YP_006011749.1 MerR family transcriptional regulator BAC0301 Protein 7e-27 49