|
Name : Sput200_3833 (Sput200_3833) Accession : YP_006011666.1 Strain : Shewanella putrefaciens 200 Genome accession: NC_017566 Putative virulence/resistance : Unknown Product : putative plasmid transfer protein Function : - COG functional category : - COG ID : - EC number : - Position : 4316168 - 4318351 bp Length : 2184 bp Strand : + Note : KEGG: eca:ECA0560 putative plasmid transfer protein DNA sequence : ATGTCCACAGAGATACAGTTAGACGGTCGGCTTAGACCTTGCTACGAATACCAAGCCAGCGTCAATGCTGCGGTAATGTC ATTTGCAGCAACCAAAATGCCCTATCTAATGGGCGTCCCATTTGTTAGCAGTTATGCCACAGCCATTGGATTAGGACTGT TAGGCGTCGCTCAATACTACAAAGGGCGCAAACTCCGTCGTTACCAGGAAGGGCTCAGAAACTTACAACCATTCTTTATC CAAACAGAAGATTTACCAGTTTCGGAAGATGAATTTTGGTTAGGCCGTGGTTATGAGGTAACTCAGGTACACGCTCAGCG TATGTACGAGTGCAATACACCAAATGGGATACCTTACACAAAACCTAGTAAGGCATATAATCGGGCAAGGCAAATTAGCC GAAAAGCTAAAAAGCAAGGGGCTTCATGGCCAATTAAAACCTTAGCTAAAAGGTTGGATGGGCAACACTTTGTAACCGTG AACCTAGGGGGGAAAAAGGTTTCTCTTTTCAAAAACCCTGTTGCACCTTACCCAAATGTCGGCGGCGAACCCTACTTACA CGGCGTAGGCATCGAGGATGAAACCGACGTTCTTACCCCTCTCAAATCAATGGAAGGTCATGTTCTCGTTATGGGGACGA CTGGCTGCGGCAAAACTCGTGCAGCTGAAATCTTCCTAACCGCAGATATAGCGAGAAAGATTAAGCGCACAATCCAGAAG CGAACCCCGAGCGGCGACATTGAGAAGCAAACAGTATCTCAGCCGGACGGTTGCGTTGTGTGCTTTGACCCTAAAGGCGA CCCTGAACTATTAGCGAGAGTCTACTCAGAAGCAAAACGCGCTGGCAGGCCATTCATTTTCTTCCACTTAGGCGAGGCTG GTATTTCAGCCAGATATAACGGCGTCGGTAACTTTAGCCGACTAAGTGAAGTGGCCACACGTATTTCCGGCCAATTAGCA GGCTCTGGTGATAGCGCCGCATTTAAAGAGTTCGCTTGGCGGTTCATTTCGATTATTGCAAAAGCATTATTCAGTATGGG TTTACGCCCGAGCTACCAAGACATTCGCAGCTATATCATGGATATGGAGTCACTGTTTATCCGGTATGCAGAGCATTACT TAGCTGAACTTGGTGTTAGTGATTGGCGTGTGCTAGTGGATGACCTAGTTCTAACCATCAAAAAGGTACCAGAAAATCTC AAAGGTGCCAGCCGTAGGTCAGTGGCTTTAGACTCACTGATTCAGTCTTTCACACAAGCCAATTCAATTCGAGTCACCCC TGCTTACGAAGGGCTTTTGAATGCTGTGAAATACGATGCGTCGTACTTCTCGAAGATCACAGCTTCTCTTTTGCCACTGC TCGAAAAACTTTGCTCCGGGGATAACTTAGAAATCTTATCGCCTGACTATTCAGATATGAACGACACAAGACCAATTCTG GATTGGACTCAAGCCATTCGCCAAGGAGCTGCCGTTTATTGTGGCTTTGCCGCGATGGTTGACCGGGACGTAGCAAGCGC TGTTTCTAACTCGATGCTATCAGACTTGTTATCCCTATCAGGGAAAATCTATCAATCTGGCATTAACTACGGTGTTGATG CTGCCAGCCCTAAAGAACGCGCAAACGTCTACCTTCATTTAGATGAAGCAAACGAAATGTGCGGTGATGAATACATTCCA ATTCTGAACAAGGCGCGTGGTGCTGGCTTGCGTGTAATCGCATACACCCAATCTCGCCAAGACTTCGAGGTGAGGTTAGG CGATAAGGCAAAAGCTCAAGTTGTTGAGTCAAACTACAACACAATCATCATGTTCAGGGTAAAAACTGAGGACACGGCCA AGCTACTCACAGACCAGCTTAAAGAGGTCAATATCTACGACCTGTCAGTAGGGTCGATGATTAGCCCTGAATTAAACGTC GATGACGAATCATTAATGACTACTCGTATTAATAACTCTGTATCAATCGTCAAGACACAAAAGCTACTTAAACCGGATGA CATTATTTCCTTACCTAAGGGGCAAGCCTATGCCCTGCTTGAAGGCTCTAAGCTATACAAGCTCCGGTTCCCACTACCTA AAGAATCCGCTCACACGTTACCACCAGAGCTAAGCCTGATTTACAGCAAAATGAAGAAGCAATATCGCTCCTACGATAAC TGGTGGGAAAAAGAAGTTGCCTAA Protein sequence : MSTEIQLDGRLRPCYEYQASVNAAVMSFAATKMPYLMGVPFVSSYATAIGLGLLGVAQYYKGRKLRRYQEGLRNLQPFFI QTEDLPVSEDEFWLGRGYEVTQVHAQRMYECNTPNGIPYTKPSKAYNRARQISRKAKKQGASWPIKTLAKRLDGQHFVTV NLGGKKVSLFKNPVAPYPNVGGEPYLHGVGIEDETDVLTPLKSMEGHVLVMGTTGCGKTRAAEIFLTADIARKIKRTIQK RTPSGDIEKQTVSQPDGCVVCFDPKGDPELLARVYSEAKRAGRPFIFFHLGEAGISARYNGVGNFSRLSEVATRISGQLA GSGDSAAFKEFAWRFISIIAKALFSMGLRPSYQDIRSYIMDMESLFIRYAEHYLAELGVSDWRVLVDDLVLTIKKVPENL KGASRRSVALDSLIQSFTQANSIRVTPAYEGLLNAVKYDASYFSKITASLLPLLEKLCSGDNLEILSPDYSDMNDTRPIL DWTQAIRQGAAVYCGFAAMVDRDVASAVSNSMLSDLLSLSGKIYQSGINYGVDAASPKERANVYLHLDEANEMCGDEYIP ILNKARGAGLRVIAYTQSRQDFEVRLGDKAKAQVVESNYNTIIMFRVKTEDTAKLLTDQLKEVNIYDLSVGSMISPELNV DDESLMTTRINNSVSIVKTQKLLKPDDIISLPKGQAYALLEGSKLYKLRFPLPKESAHTLPPELSLIYSKMKKQYRSYDN WWEKEVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF SG68 | AAN62290.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 3e-117 | 42 |
| YpsIP31758_3718 | YP_001402672.1 | hypothetical protein | Not tested | YAPI | Protein | 9e-112 | 41 |
| api27 | CAF28501.1 | hypothetical protein | Not tested | YAPI | Protein | 3e-112 | 41 |
| YE3493 | YP_001007651.1 | TraG-family protein | Not tested | YAPI | Protein | 3e-111 | 41 |
| PMI2588 | YP_002152307.1 | plasmid transfer protein | Not tested | Not named | Protein | 1e-107 | 41 |
| ORF C65 | AAN62159.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 2e-117 | 41 |
| traG | CAI36113.1 | putative TraG family conjugative protein | Not tested | PPHGI-1 | Protein | 9e-106 | 41 |
