Gene Information

Name : Sput200_3758 (Sput200_3758)
Accession : YP_006011598.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Resistance
Product : MerR family transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4258298 - 4258702 bp
Length : 405 bp
Strand : -
Note : TIGRFAM: Hg(II)-responsive transcriptional regulator; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; KEGG: shw:Sputw3181_3205 MerR family transcriptional regulator; SMART: regulatory protein MerR

DNA sequence :
ATGGACGTAACTTTGTATACAATCGGCCAATTAGCTAATGCAGCTGTCGTTAACGTTGAAACTATCCGCTACTACGAACG
CCGCGGTCTTGTTGAACAGCCTGGTAAACCGACACAGGGGTTTCGCCGGTATCCTGTCACTACCCTGAATCGGCTTCGAT
TTATCAAGCGGGCGCAGGAGTTAGGGTTCACACTGGAAGAAATCCATCATCTGCTCACACTCAATGATACCCCATGTCAG
GGCGTTCAGGACGTGGCCACACTCAAGCTTGCCAATGTCCGCTCAAAGATTGCAGATCTGCAGAGTCTGGAACTTGTTCT
TCATCACCTGCTGAGCCAATGCGCATCCAATCCGGATCAGACCCATTGCCCCATTATCGAATCCCTACAACCACATAACA
ACTAA

Protein sequence :
MDVTLYTIGQLANAAVVNVETIRYYERRGLVEQPGKPTQGFRRYPVTTLNRLRFIKRAQELGFTLEEIHHLLTLNDTPCQ
GVQDVATLKLANVRSKIADLQSLELVLHHLLSQCASNPDQTHCPIIESLQPHNN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
merR CAJ77064.1 Mercury resistance operon regulatory protein Not tested AbaR1 Protein 1e-22 49
merR ACN81009.1 MerR activator/repressor of mer operon Not tested AbaR5 Protein 2e-22 49
unnamed ABR13397.1 mercuric resistance operon regulatory protein Not tested PAGI-5 Protein 2e-22 47
merR AFG30124.1 MerR Not tested PAGI-2 Protein 3e-22 47
merR AGK07025.1 MerR Not tested SGI1 Protein 3e-22 47
merR AGK07083.1 MerR Not tested SGI1 Protein 3e-22 47
merR YP_006098391.1 mercuric resistance operon transcriptional regulator Not tested Tn2411 Protein 4e-22 47
merR ACK44535.1 MerR Not tested SGI1 Protein 3e-22 47
merR AET25401.1 MerR Not tested PAGI-2(C) Protein 3e-22 47
EXB37 ABD94723.1 putative regulator of mercury resistance conferring proteins Not tested ExoU island B Protein 3e-24 46
merR AAN62181.1 organomercurial resistance regulatory protein MerR Not tested PAGI-2(C) Protein 1e-21 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sput200_3758 YP_006011598.1 MerR family transcriptional regulator BAC0684 Protein 1e-23 50
Sput200_3758 YP_006011598.1 MerR family transcriptional regulator BAC0689 Protein 4e-23 50
Sput200_3758 YP_006011598.1 MerR family transcriptional regulator BAC0688 Protein 2e-23 49
Sput200_3758 YP_006011598.1 MerR family transcriptional regulator BAC0687 Protein 1e-22 49
Sput200_3758 YP_006011598.1 MerR family transcriptional regulator BAC0232 Protein 1e-22 49
Sput200_3758 YP_006011598.1 MerR family transcriptional regulator BAC0683 Protein 9e-23 49
Sput200_3758 YP_006011598.1 MerR family transcriptional regulator BAC0686 Protein 1e-23 47
Sput200_3758 YP_006011598.1 MerR family transcriptional regulator BAC0682 Protein 5e-23 46