Gene Information

Name : Sput200_3284 (Sput200_3284)
Accession : YP_006011143.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Unknown
Product : ISSpu24 insertion element protein, TnpB_ISSpu24
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3729372 - 3729719 bp
Length : 348 bp
Strand : -
Note : PFAM: IS66 Orf2 family protein; KEGG: bpt:Bpet1143 hypothetical protein

DNA sequence : 
ATGATCACTTTATCTCATGATGTACGGATCTGGTTATGTGCCGGCCACACCGATATGCGTAAAGGCTTTGATAGTTTATC
TGCGATTGCGCAGCATATATTACAAAAAGATCCCTTTAATGGGCATGTTTTTGTGTTTCGCGGCAAACGTGGTGATCGGG
TTAAATTACTATGGTGGGATGGCCAAGGATTATGTCTGTATTATAAACGTTTGGAGCACGGACGTTTTGTGTGGCCGAGC
GCAACATCCGGTGCTGTTCACTTATCACAAGCCCAATTATCCATGCTATTAGAGGGCATTGATTGGCGCCCACCGGCAAG
GCGATATCGACCGGGAAATAGTGCGTAA

Protein sequence : 
MITLSHDVRIWLCAGHTDMRKGFDSLSAIAQHILQKDPFNGHVFVFRGKRGDRVKLLWWDGQGLCLYYKRLEHGRFVWPS
ATSGAVHLSQAQLSMLLEGIDWRPPARRYRPGNSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BCAM0247 YP_002232879.1 putative transposase Not tested BcenGI11 Protein 7e-30 64
hp4 AAC61716.1 Hp4 Not tested PAI I CFT073 Protein 4e-31 63
Z5097 NP_290248.1 prophage-associated protein Not tested LEE Protein 6e-31 63
Z1132 NP_286667.1 hypothetical protein Not tested TAI Protein 2e-30 63
unnamed AAL99258.1 unknown Not tested LEE Protein 4e-31 63
ECs4546 NP_312573.1 hypothetical protein Not tested LEE Protein 6e-31 63
Z1571 NP_287075.1 hypothetical protein Not tested TAI Protein 2e-30 63
unnamed ACU09438.1 IS66 family element orf2 Not tested LEE Protein 4e-31 63
c3578 NP_755453.1 hypothetical protein Not tested PAI I CFT073 Protein 6e-31 63
unnamed AAC31493.1 L0014 Not tested LEE Protein 4e-31 63
Z4336 NP_289561.1 hypothetical protein Not tested OI-122 Protein 6e-31 63
c3561 NP_755436.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-30 62
ECUMN_3327 YP_002414007.1 putative transposase ORF2, IS66 family Not tested Not named Protein 1e-30 62
unnamed AAL08461.1 unknown Not tested SRL Protein 1e-30 61
pB171ORF50 CAD66190.1 ORF50 protein of pB171 Not tested PAI III 536 Protein 8e-34 60
aec52 AAW51735.1 Aec52 Not tested AGI-3 Protein 7e-34 60
ECO103_3553 YP_003223420.1 hypothetical protein Not tested LEE Protein 9e-31 60
unnamed ADD91739.1 hypothetical protein Not tested PAI-I AL862 Protein 7e-34 60
Z4316 NP_289542.1 hypothetical protein Not tested OI-122 Protein 9e-31 60
l0014 CAD33776.1 L0014 protein Not tested PAI I 536 Protein 5e-23 59
Z1160 NP_286695.1 hypothetical protein Not tested TAI Protein 4e-31 55
Z1599 NP_287103.1 hypothetical protein Not tested TAI Protein 4e-31 55
ECO103_3567 YP_003223430.1 hypothetical protein Not tested LEE Protein 7e-30 55
Z4338 NP_289563.1 hypothetical protein Not tested OI-122 Protein 7e-30 55
ECUMN_3364 YP_002414037.1 putative transposase ORF2, IS66 family Not tested Not named Protein 6e-31 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sput200_3284 YP_006011143.1 ISSpu24 insertion element protein, TnpB_ISSpu24 VFG1709 Protein 2e-31 63
Sput200_3284 YP_006011143.1 ISSpu24 insertion element protein, TnpB_ISSpu24 VFG0792 Protein 2e-31 63
Sput200_3284 YP_006011143.1 ISSpu24 insertion element protein, TnpB_ISSpu24 VFG1698 Protein 3e-31 62
Sput200_3284 YP_006011143.1 ISSpu24 insertion element protein, TnpB_ISSpu24 VFG1052 Protein 5e-31 61
Sput200_3284 YP_006011143.1 ISSpu24 insertion element protein, TnpB_ISSpu24 VFG1665 Protein 3e-34 60
Sput200_3284 YP_006011143.1 ISSpu24 insertion element protein, TnpB_ISSpu24 VFG1517 Protein 2e-23 59
Sput200_3284 YP_006011143.1 ISSpu24 insertion element protein, TnpB_ISSpu24 VFG1737 Protein 2e-31 54