Gene Information

Name : Sput200_0316 (Sput200_0316)
Accession : YP_006008268.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Resistance
Product : ATP-dependent DNA helicase RecG
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 335047 - 337122 bp
Length : 2076 bp
Strand : -
Note : TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: shw:Sputw3181_0304 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase

DNA sequence :
TTGCAGCAATTGGATCTTGTTCCGATCACCGACCTCAAAGGCGTCGCCAAAAAGGTCGCGGAGAAACTCGCAAAGCTCGG
CATCACAACAGTACAAGATCTGCTGTTTCACTTACCCCTGCGCTACGAAGACAGAACCCAAATCTATCCGATTGCCGCCC
TCAGCCCTGGTAGTTACGGCACGATAGAAGCAGAAATCCAATCGACACAAATCATCCAAGGCCGCAAGCGCATGCTGGTC
TGCAATGTGCGCGACGATACGGGCAGCTTAAGCCTGCGCTTCTTTAACTTTTCCGTTGCTCAGCGTAATGCCATGCAAAA
TGGTTTGATGATCCGCGCCTATGGTGAAGTGCGCCGTGGTAGTCATCAAGCTGAGATAGTGCATCCAGAATATAAAGTGG
TGTATCCCGGTGAAGATGTTCACCTGAGTGATACCCTAACGCCGATTTATCCCACAACTGAAGGCTTAAAACAGGCGAGT
TGGCTAAAGCTGACGGAGCAAGCCTTAGTATTGCTGAAAGAGGGTGGCTTAACTGAGCTGCTGCCACCGCAATTGCAACC
TAACAACATCAGCCTTAAACAAGCACTGCAGACGTTACATCGCCCTCCTGCGGGGATCTCTCAGTTCGATTTAGAGCTAG
GTCAACACCCTGCCCAGCAACGACTCGTGCAGGAAGAATTACTCGCCCATAATCTCAGCATGTTGCGCCTACGGCAGCGC
AGTAATTTAGACGCTGCCGTCACCATGCAGGCCACGGGGCAGTTGCTCAATCCCTTCCTCGCAGCTCTGCCCTTTAAGCC
GACTGGCGCCCAGCAAAGAGTCGTGGCTGATATAGGCAAAGATTTAGAAAAACCACACCCTATGATGCGCTTAGTGCAAG
GGGATGTTGGCTCAGGCAAAACCTTAGTCGCGGCGATGGCGGCATTGCAAGCGATTGAAAATGGTTATCAAGTTGCCATG
ATGGCACCAACCGAATTATTAGCAGAGCAACATGCGACTAACTTTGCCGCTTGGTTTGAGCCACTCGGGCTTAAAGTCGG
TTGGCTTGCAGGGAAACTGAAAGGCAAGGCCAGAACCCAATCCCTTGCGGATATTGAATCTGGCGCAGCCCAGATGGTGA
TTGGCACCCATGCCATCTTCCAGCAGCATGTGGTCTTTAACAAACTCGCGTTAATTATTATCGATGAGCAGCACAGATTC
GGCGTACACCAACGCTTAGGTCTGCGGGAAAAAGGCATGAGCCAAGGCTTTCATCCACATCAGTTAATCATGACTGCAAC
CCCCATTCCACGCACATTGGCGATGACGGCCTATGCAGATCTCGACACCTCCATTATCGATGAACTGCCACCGGGGCGTA
CACCCGTCACCACAGTGGCAATTGCCGATTCCCGCCGTAACGAAGTGCTTGAACGGGTGCGCAACGCCGTCATCACCGAC
CAACGTCAAGCCTACTGGGTGTGTACTCTGATTGAAGAGTCTGAAGTGCTCGAATGCCAAGCCGCCGAAGACACGGCCGA
AGAACTGCGTCTCGCACTGCCAGATCTCAATATCGGCCTAGTGCATGGCAGATTAAAAAGTGCCGAGAAACAGCAAATCA
TGGCCGACTTTAAGGCAGGCATGATTCATCTACTGGTAGCGACAACCGTGATTGAAGTCGGCGTCGACGTGCCCAATGCT
AGCCTAATGATCATCGAAAACCCTGAACGTTTAGGTCTAGCACAACTGCATCAACTGCGCGGACGAGTCGGTCGAGGCGC
CATCGCAAGCCATTGTGTGTTACTCTACAAGGCGCCGTTGAGCCATACCGCCACCCAACGACTGAGTGTCCTCAGACAAA
GCAATGATGGTTTCATCATAGCGCAGAAAGATTTAGAAATTCGTGGCCCGGGTGAAGTGCTTGGCACTAAACAGACGGGG
CTCGCCGAGCTCAAAATTGCCGATCTGGTGCGCGATCAAGCTTTGATCCCACACATTCAGAAACTGGCAAATCATGTAAT
GACGCAGGCACCTGAAAAGGTCGATGCAATTATTTTACGTTGGCTCGGGCACAGACAGCACTATGTGCAGGCTTAA

Protein sequence :
MQQLDLVPITDLKGVAKKVAEKLAKLGITTVQDLLFHLPLRYEDRTQIYPIAALSPGSYGTIEAEIQSTQIIQGRKRMLV
CNVRDDTGSLSLRFFNFSVAQRNAMQNGLMIRAYGEVRRGSHQAEIVHPEYKVVYPGEDVHLSDTLTPIYPTTEGLKQAS
WLKLTEQALVLLKEGGLTELLPPQLQPNNISLKQALQTLHRPPAGISQFDLELGQHPAQQRLVQEELLAHNLSMLRLRQR
SNLDAAVTMQATGQLLNPFLAALPFKPTGAQQRVVADIGKDLEKPHPMMRLVQGDVGSGKTLVAAMAALQAIENGYQVAM
MAPTELLAEQHATNFAAWFEPLGLKVGWLAGKLKGKARTQSLADIESGAAQMVIGTHAIFQQHVVFNKLALIIIDEQHRF
GVHQRLGLREKGMSQGFHPHQLIMTATPIPRTLAMTAYADLDTSIIDELPPGRTPVTTVAIADSRRNEVLERVRNAVITD
QRQAYWVCTLIEESEVLECQAAEDTAEELRLALPDLNIGLVHGRLKSAEKQQIMADFKAGMIHLLVATTVIEVGVDVPNA
SLMIIENPERLGLAQLHQLRGRVGRGAIASHCVLLYKAPLSHTATQRLSVLRQSNDGFIIAQKDLEIRGPGEVLGTKQTG
LAELKIADLVRDQALIPHIQKLANHVMTQAPEKVDAIILRWLGHRQHYVQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 1e-101 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sput200_0316 YP_006008268.1 ATP-dependent DNA helicase RecG BAC0356 Protein 0.0 59