|
Name : Sput200_2958 (Sput200_2958) Accession : YP_006010826.1 Strain : Shewanella putrefaciens 200 Genome accession: NC_017566 Putative virulence/resistance : Unknown Product : IS10A transposase, TnpA_IS10A Function : - COG functional category : - COG ID : - EC number : - Position : 3349111 - 3350319 bp Length : 1209 bp Strand : + Note : PFAM: transposase IS4 family protein; KEGG: shw:Sputw3181_3852 transposase, IS4 family protein DNA sequence : ATGCGCGAAGCCAATATCCTACAACATTCTTTACACCAATACTGCCCAGAACTTCACCTAAAACGATTAAACAGCTTGAT GCTGGCCTCTAAGGCACTGATTGAATGTAAGACACTGACCTTGACTGAGTTAGGTCGAAATTTACCAACCACGGCCCGAA CCAAGCACAACATCAAGCGCATTGATCGTTTGCTCGGCAACACGCATCTGCATCAAGAACGGTTAGCTGTCTACCAATGG CATGCCAGCCTCATCTGTTCTGGTAACCCTATGCCGATTGTGCTCGTCGATTGGTCAGACATCCGAGAGCATAAACGCAT CATGGCTCTGCGCGCCTCAATAGCCTTCAATGGCCGCTCTATTACCCTGTATGAGAAGTCCTATCCCCTATCAGAACAAT GCTCTAAGGCCTCCCACAACGGTTTTTTAGCGGACTTAGCCAAGATTTTACCTTTGCATGTTACCCCTCTCATCGTGACT GACGCGGGGTTCAAAGTGCCTTGGTACAAAGAGGTTGAGGCGCATGGTTGGTTTTGGCTAAGCCGTATTCGCGGTACAGT TCAATTTGCAGATATTGGCGCTGAAAATTGGCGTGCAGTTCGCAGTACACATGACTTGGCCAACGGTCAAGCGAAGAGCC TGGGTTGTAAGACCTTGACCAAAACTAACCCTATCAATTGCCATCTCACGCTTTATCGTAGCAAACCTAAGGGGCGTACA AATCAGCGTTCAACGAGGACTAATTGCCACCATCCATCGGCAAAAACGTACTCAACATCGGCGAAAGAGCCTTGGGTGTT AGCCAGCAATTTACCACCAGAATCTCGGAGCCCAAAGCAGCTGGTAAACCTGTACGCCAAACGTATGCAAATAGAGGAAA CCTTTCGTGACCTCAAAAGCCCGGCATACGGCTTTGGCTTACGCCAAAGTCGTACCAACAGTCCAGAGCGATTCGACATC ATCCTACTGATAGCGTTGATGGTTCAATGCCTGTTGTGGCTAGTTGGTTTACACGCACAGCAACAGGGCTGGGATAAGCA TTTTCAGGCCAATACCATTGGGCATCGAACGGTACTCTCAACGATTCGCTTGGGATTGGAGGTACTCAGGCGGCCTGATT ATCAAATCACGGAGAAAGAATTGCTGGCGGCCTGGGTATTATTCGCCAATCAGTTGCTCAAATATGGCTATGCTATGGCT GATTTATGA Protein sequence : MREANILQHSLHQYCPELHLKRLNSLMLASKALIECKTLTLTELGRNLPTTARTKHNIKRIDRLLGNTHLHQERLAVYQW HASLICSGNPMPIVLVDWSDIREHKRIMALRASIAFNGRSITLYEKSYPLSEQCSKASHNGFLADLAKILPLHVTPLIVT DAGFKVPWYKEVEAHGWFWLSRIRGTVQFADIGAENWRAVRSTHDLANGQAKSLGCKTLTKTNPINCHLTLYRSKPKGRT NQRSTRTNCHHPSAKTYSTSAKEPWVLASNLPPESRSPKQLVNLYAKRMQIEETFRDLKSPAYGFGLRQSRTNSPERFDI ILLIALMVQCLLWLVGLHAQQQGWDKHFQANTIGHRTVLSTIRLGLEVLRRPDYQITEKELLAAWVLFANQLLKYGYAMA DL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| IS1999 | CAJ77042.1 | Insertion sequence | Not tested | AbaR1 | Protein | 0.0 | 100 |
| tnp | AEA34664.1 | IS10 transposase | Not tested | Not named | Protein | 2e-145 | 72 |
| IS10 | CAI43894.1 | transposase for IS10 | Not tested | LEE | Protein | 8e-146 | 72 |
| SF2983 | NP_708757.1 | iso-IS10R ORF | Not tested | SHI-1 | Protein | 1e-144 | 71 |
| tnp | AEA34674.1 | IS10 transposase | Not tested | Not named | Protein | 3e-144 | 71 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sput200_2958 | YP_006010826.1 | IS10A transposase, TnpA_IS10A | VFG0647 | Protein | 6e-145 | 71 |
