Gene Information

Name : Sput200_2886 (Sput200_2886)
Accession : YP_006010756.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3258063 - 3260633 bp
Length : 2571 bp
Strand : +
Note : TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS III domain protein; MutS IV domain protein; KEGG: shw:Sputw3181_1264 DNA mismatch repair protein MutS; SMART: DNA mismatch repai

DNA sequence :
ATGAATGTAATTGATACCGATGATTTAGAAAAACATACCCCCATGATGCGTCAATATTTGACGATGAAAGCAGAACATCA
CGATATGCTACTGTTTTATCGCATGGGTGACTTCTATGAACTCTTCTATGATGACGCTAAACGTGCTTCTGAGTTATTAG
GCATCTCCCTGACTGCCCGCGGAAAGAGTGGCGGCGATCCAATCCCAATGGCTGGCATTCCCTATCATGCGGTTGAAGGT
TATTTGGCTAAATTGGTTCAAATTGGTCAATCTGTTGCAATTTGCGAGCAGATTGGCGATCCCGCGACCGCTAAAGGTCC
GGTTGAGCGTAAAGTCGTACGCATAGTAACACCCGGCACCTTAACCGATGAAGCCCTGTTACAAGAACGCCAAGACAATC
TTTTAGCCGCAGTTTATCAAGGTAAAGTTGGATTTGGCTATGCGACCCTCGATGTTTCCTCTGGCCGATTTGTGATTGCA
GAGCTTGATACAAGGGAATCCTTAGAAGCCGAATTACAACGTACAAATCCAGTCGAAATTCTTTACAGTGAAGATTTTGG
TGAACTTGGCTTGCTAAGCCACTTCAAAGGCAAACGTCGTCGTCCCGAGTGGGAATTTGATTACGACACCAGCATCAAAC
TTTTACTTGCACAATTTGGCACTAAAGATCTTCATGGTTTTGGCATTAGCGATGCGCGTCTATCACTGCAAGCCGCTGGT
TGCTTAATGCAGTATGTTAAAGATACACAACGTACTGCCCTGCCCCATATCAATGCCATAATTCGCTTTAATCAAGCGGA
TAGTATAGTACTTGATGCCGCAACCCGCCGTAACTTGGAACTCACCCAGAATCTAGCGGGTGGCCGTGATAATACCTTAG
CAACCGTATTAGATAATACTGCGACAGCAATGGGAAGCCGTATGCTGCAGCGCTGGATCCATCAGCCATTACGGGATCCT
AATCAAATTATCGCCCGCCAAACGGCTGTGAATGAATTACTTAAGACAGGCACACATGAACCACTCCATGAACAGCTTAA
GGCACTGGGTGACATTGAGCGTATTATGGCAAGGCTTGCGCTGCGTACTGCTCGACCACGGGATTTTGCACGCCTACGTC
AAGCATTGAGTTTATTACCTGAATTACAACAAAGCTTAAGCGTGCTAAATGCACCTCATACCGTCAAACTATGTCAATAT
TTGGGTGAATTTCCCGAAGAACAGGCCCTACTCGAGCGCGCCATTGTTGATAATCCCCCTATGCTTATTCGTGATGGTGG
CGTGATCCGCGAAGGCTACAATAATGAACTTGATGAATGGCGCGGTCTGAGTGAGGGGGCCAGCGACTATTTGGTTCAAC
TTGAAGCAAGGGAAAAAGAACGTACTGGCATCAATACACTAAAAGTCGGCTATAACCGCGTACATGGTTATTATATTGAA
GTCAGCCGCTTGCAATCTTCACAAGTGCCGCTCAATTATCAACGACGCCAAACGCTTAAAAATATGGAGCGTTATATCAC
GCCCGAACTTAAGGAGTACGAAGAAAAAGTGCTCTCAAGCCAAGGTAAAGCGCTGGCCCTTGAAAAACAGCTATGGGAAC
AGCTTTTCGATCTTATTCTGCCCAAACTACATGAGTTACAAGCGTTTGCTAGAGCGGCTGCTGAACTCGATGTATTAAGT
AATTTTGCCGAACGCGCTGAAACTTTAGGATATATCTGTCCTCAGCTAAGCCAGGATATCGGCGTCCAGATTGATGCAGG
CAGACATCCCGTCGTTGAACGCGTCAGTCAAACCCCCTTTATCGCCAATCCAGTCACCTTGCACAATCAAAGACGCATGT
TGATAGTGACAGGACCCAATATGGGGGGTAAGTCGACTTATATGCGCCAAGTCGCCTTAATCACGCTTATGGCTCATATT
GGCTGTTTTGTACCGGCAGAGCGAGCTGTGATAGGGCCTATTGATCGCATATTTACTCGTATTGGTGCATCGGACGATTT
AGCTTCAGGCCGTTCAACCTTTATGGTCGAAATGACTGAGACTGCCAATATCCTCCATAATGCAACGGCTCAAAGTCTGG
TATTAATGGATGAAATTGGCCGTGGTACATCGACCTACGATGGCTTATCTTTAGCTTGGTCTGCTGCAGAGTATCTCGCC
CAACAAATCGGTGCTATGACGTTATTTGCTACCCACTATTTTGAGCTAACCCAACTGCCGGATCTTATGGCTGGTGTCTA
TAACGTCCATTTAGACGCGATAGAACATGAGGATACCATCGCCTTTATGCATGCGGTACAAGAAGGCGCCGCCAGTAAAA
GCTACGGCTTACAGGTTGCAGCACTCGCGGGCGTACCAGCGAAAGTCATTAAGGCAGCCAAACACAAGTTGCAGCAATTA
GAAAGTCGCGATCATCAGCTTGAGGGCACAAAAACACCCATTCAAACCCTACTCGCCCTACCTGAGCCGGCTGAGAATCC
CGCTCTAACTAAGTTACAAGCAATAAATCCCGATAATTTAACGCCTAAACAAGCACTTGATTTACTCTACGAATTAAAGC
GCTTGAGCTAA

Protein sequence :
MNVIDTDDLEKHTPMMRQYLTMKAEHHDMLLFYRMGDFYELFYDDAKRASELLGISLTARGKSGGDPIPMAGIPYHAVEG
YLAKLVQIGQSVAICEQIGDPATAKGPVERKVVRIVTPGTLTDEALLQERQDNLLAAVYQGKVGFGYATLDVSSGRFVIA
ELDTRESLEAELQRTNPVEILYSEDFGELGLLSHFKGKRRRPEWEFDYDTSIKLLLAQFGTKDLHGFGISDARLSLQAAG
CLMQYVKDTQRTALPHINAIIRFNQADSIVLDAATRRNLELTQNLAGGRDNTLATVLDNTATAMGSRMLQRWIHQPLRDP
NQIIARQTAVNELLKTGTHEPLHEQLKALGDIERIMARLALRTARPRDFARLRQALSLLPELQQSLSVLNAPHTVKLCQY
LGEFPEEQALLERAIVDNPPMLIRDGGVIREGYNNELDEWRGLSEGASDYLVQLEAREKERTGINTLKVGYNRVHGYYIE
VSRLQSSQVPLNYQRRQTLKNMERYITPELKEYEEKVLSSQGKALALEKQLWEQLFDLILPKLHELQAFARAAAELDVLS
NFAERAETLGYICPQLSQDIGVQIDAGRHPVVERVSQTPFIANPVTLHNQRRMLIVTGPNMGGKSTYMRQVALITLMAHI
GCFVPAERAVIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATAQSLVLMDEIGRGTSTYDGLSLAWSAAEYLA
QQIGAMTLFATHYFELTQLPDLMAGVYNVHLDAIEHEDTIAFMHAVQEGAASKSYGLQVAALAGVPAKVIKAAKHKLQQL
ESRDHQLEGTKTPIQTLLALPEPAENPALTKLQAINPDNLTPKQALDLLYELKRLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sput200_2886 YP_006010756.1 DNA mismatch repair protein MutS VFG0562 Protein 0.0 67