Gene Information

Name : Sput200_2853 (Sput200_2853)
Accession : YP_006010722.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3215344 - 3216297 bp
Length : 954 bp
Strand : -
Note : PFAM: Protein of unknown function DUF1722; protein of unknown function DUF523; KEGG: shw:Sputw3181_1296 hypothetical protein

DNA sequence :
ATGTATAAGTTTAACCCGCAGCGAATTCAGATTGGGATCAGTGCTTGTCTATTGGGTGAAAAAGTTCGCTTCGATGGGGG
GCACAAAAATTCTTCCTATTGTAATCAAGAGATTAAAAATTTTTTTGATTATGTTCCCATTTGTCCTGAGATGGCGATTG
GTCTAGGTGCACCTCGTAAAAGCATACGTTTAGTGCGTGATGGTGAAACCATACTTGTTCAAAGCGGCGATGGTAGCTTA
GATGTCACCGACAGACTGAATGCTTACAGTGAAAGCAAAGTACAAGAGCTAGATTTTTTAGGGGGATACTTGCTCTGTGC
TAAATCACCTACATGCGGTATGGAACGGGTGACTGAGTACAAAATAGGCACGAATAACGGCACAAAATCGGGTATCGGTG
TGTTTGCTCGCAAGTTAATGGAGCGTTATCCATTACTACCCGTGGAGGAGGAGGGGCGCTTACACGATATGGTATTACGG
GAAAACTTTTTTACCCGCGTTTATGCCTATCACGATTGGCACCAAATGAAGCACGAAGGATTAACTAAGCATAAATTGGT
TAAGTTTCACTCCCGTTATAAATATCTGCTCATGGCCCACAGCCCTAAATGGTATCGCGAGCTAGGACCTATTATTGCCA
ATATTGACGATCTTGAAACCAGTGCGACTCGCTATTTTGAAGGCTTTATGACGGCACTTAAAATTAATGCGACTCGTAAG
AATCACACCAGCACGTTACAGCATATTCAAGGTTATTTTAAAAAGCATTTGAGCAAAGAGCAAAAGACAGAACTATCTGA
AGCCATTATGAAATATCGACAAGGCCTCTTGCCATTATTGGTGCCTATTACCTTGATAAATCATTATCTGCGGGAATTTC
CAACCCCCTATATTGAAGACCAAGTGTATTTGAATCCTCATCCTGAGGCGTTAAAACTGCGTTACGCATATTAA

Protein sequence :
MYKFNPQRIQIGISACLLGEKVRFDGGHKNSSYCNQEIKNFFDYVPICPEMAIGLGAPRKSIRLVRDGETILVQSGDGSL
DVTDRLNAYSESKVQELDFLGGYLLCAKSPTCGMERVTEYKIGTNNGTKSGIGVFARKLMERYPLLPVEEEGRLHDMVLR
ENFFTRVYAYHDWHQMKHEGLTKHKLVKFHSRYKYLLMAHSPKWYRELGPIIANIDDLETSATRYFEGFMTALKINATRK
NHTSTLQHIQGYFKKHLSKEQKTELSEAIMKYRQGLLPLLVPITLINHYLREFPTPYIEDQVYLNPHPEALKLRYAY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 2e-71 47
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 2e-71 47
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 2e-71 47
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 1e-71 47
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 1e-71 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sput200_2853 YP_006010722.1 hypothetical protein VFG0490 Protein 7e-72 47