Gene Information

Name : Sput200_2731 (Sput200_2731)
Accession : YP_006010601.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Virulence
Product : flagellar biosynthetic protein FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3090304 - 3091050 bp
Length : 747 bp
Strand : -
Note : KEGG: shw:Sputw3181_1437 flagellar biosynthesis protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein

DNA sequence :
ATGACAAAGTACAGTTTCCCATTAATCGGGCTTGCCATTTTATTCTTTAGTGTATCGGTCGGGGCGGCAGATGGAGTGTT
GCCTGCGGTCACCGTAAAAACGGCTGCCGATGGTTCGACAGAGTATTCAGTGACAATGCAGATTTTACTGCTGATGACGT
CACTGAGTTTTTTGCCAGCCATGGTGATTATGCTGACCTCGTTTACACGGATTATTGTGGTACTTTCTATTTTACGCCAA
GCGATTGGATTGCAACAGACGCCTTCTAACCAAGTGCTTATTGGCATGAGTCTCTTTATGACTTTTTTTATTATGGCGCC
CGTGTTTGACAAAATTTATGATCAAGGTGTTAAACCCTATATCGATGAACAACTGACGCTACAGCAAGCTTTTGATAAGG
GGAAAGAACCATTACGAGCTTTTATGCTAGGCCAAGTTCGTACGACAGATTTAAAAACCTTTATTGATATTTCTGGCTAT
CAAAATATTAACTCGCCAGAAGAGGCACCGATGAGCGTACTTGTGCCTGCTTTTATTACCAGTGAACTCAAAACGGCCTT
TCAAATTGGCTTTATGTTATTCGTGCCTTTTTTGGTATTAGATTTAGTAGTGGCGAGTATTTTGATGGCGATGGGGATGA
TGATGCTATCGCCGATGATAGTCTCATTGCCATTTAAGATTATGTTATTTGTGCTCGTTGATGGTTGGGGGCTTGTGTTA
GGCACCTTAGCCAATAGTTTTGGTTAG

Protein sequence :
MTKYSFPLIGLAILFFSVSVGAADGVLPAVTVKTAADGSTEYSVTMQILLLMTSLSFLPAMVIMLTSFTRIIVVLSILRQ
AIGLQQTPSNQVLIGMSLFMTFFIMAPVFDKIYDQGVKPYIDEQLTLQQAFDKGKEPLRAFMLGQVRTTDLKTFIDISGY
QNINSPEEAPMSVLVPAFITSELKTAFQIGFMLFVPFLVLDLVVASILMAMGMMMLSPMIVSLPFKIMLFVLVDGWGLVL
GTLANSFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 7e-15 43
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 7e-15 43
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 7e-15 43
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 4e-16 42
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-16 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sput200_2731 YP_006010601.1 flagellar biosynthetic protein FliP VFG1259 Protein 3e-57 66
Sput200_2731 YP_006010601.1 flagellar biosynthetic protein FliP VFG2016 Protein 1e-50 61
Sput200_2731 YP_006010601.1 flagellar biosynthetic protein FliP VFG2494 Protein 7e-51 58
Sput200_2731 YP_006010601.1 flagellar biosynthetic protein FliP VFG2338 Protein 5e-48 54
Sput200_2731 YP_006010601.1 flagellar biosynthetic protein FliP VFG0394 Protein 7e-17 41