Gene Information

Name : Sput200_2687 (Sput200_2687)
Accession : YP_006010561.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Virulence
Product : nucleotide sugar dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.1.1.22
Position : 3041562 - 3042728 bp
Length : 1167 bp
Strand : -
Note : TIGRFAM: nucleotide sugar dehydrogenase; KEGG: sbn:Sbal195_3019 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase ; UDP-glucose/GDP-mannose dehydrogenase dimerisation

DNA sequence : 
ATGAAAATCGCTATTGCTGGTACTGGCTATGTAGGCCTTTCTAATGCTGTTTTATTAGCCCAATACCATCAAGTTATTGC
TGTTGATGTGATTGCTGAAAAAGTGGAATCCATTAATAACAAACGGTCTCCGATTGTAGATAATGAAATTGAAGAGTTTT
TAACTCATCGTGAGCTAAATTTAACGGCTACCTTGGATAAGCAACTTGCTTATCAAGATGCTGAGTTTGTGATTATTGCT
ACACCGACTGATTATGACCCAAAAACCAATTATTTTAATACTTCCTCTGTTGAGTCGGTTATTCAAGATGTTATTAGCAT
CAACCCTAAGGCGGTGATGGTGATCAAATCCACCGTGCCAGTGGGCTTTACTGCCAAGGTTAAGCAAAAATATCATTGCG
GTAATATTATTTTTTCGCCTGAGTTTTTGCGTGAGGGTAGGGCACTTTATGACAATTTGCATCCATCACGGATTATTGTG
GGTGAGCGTAGCGAGCGCGCAAAAGTATTTGCTGATCTATTAGTGCAGGGCGCGGTTAAACAAGATATTGAGGTGTTATT
TACTGACTCGACTGAGGCCGAAGCGGTTAAATTATTCTCTAATACTTATCTTGCGATGCGTGTAGCTTATTTTAATGAGC
TAGATACTTATGCAGAGACTCATAGATTAGATTCACGCCAGATTATTGAAGGGGTGTGTTTAGATCCGCGTATCGGAAAT
CATTATAACAATCCCTCCTTTGGATATGGTGGTTACTGTTTACCTAAAGATACTAAGCAACTGCGCGCCAATTATGCCGA
TGTGCCAAATAGTATTATTGGTGCCATTGTGGAGTCTAACACTACCCGTAAAGACTTTGTTGCAGACTCCATTTTAAGCC
GTAATCCTAAGGTGGTGGGCATTTATCGCCTAATTATGAAATCTGGTTCGGACAACTTTAGGGCTTCAAGCATTCAAGGG
ATTATGAAACGCCTTAAAGCTAAAGGTATTGAGGTAATTGTATATGAGCCAGTACTTAAAGATAAAGAGTTTTTCCATTC
TCGCGTAGTGACAGATTTGACTGCTTTCAAAGCGGTTGCAGATGTGATTGTGTCAAACCGGATGGCTAAGGAACTGGCTG
ATGTGGTGGATAAGGTGTATACCCGTGATTTGTTTGGGAGTGATTGA

Protein sequence : 
MKIAIAGTGYVGLSNAVLLAQYHQVIAVDVIAEKVESINNKRSPIVDNEIEEFLTHRELNLTATLDKQLAYQDAEFVIIA
TPTDYDPKTNYFNTSSVESVIQDVISINPKAVMVIKSTVPVGFTAKVKQKYHCGNIIFSPEFLREGRALYDNLHPSRIIV
GERSERAKVFADLLVQGAVKQDIEVLFTDSTEAEAVKLFSNTYLAMRVAYFNELDTYAETHRLDSRQIIEGVCLDPRIGN
HYNNPSFGYGGYCLPKDTKQLRANYADVPNSIIGAIVESNTTRKDFVADSILSRNPKVVGIYRLIMKSGSDNFRASSIQG
IMKRLKAKGIEVIVYEPVLKDKEFFHSRVVTDLTAFKAVADVIVSNRMAKELADVVDKVYTRDLFGSD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0068 YP_300158.1 UDP-glucose 6-dehydrogenase Not tested SCC15305cap Protein 1e-96 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sput200_2687 YP_006010561.1 nucleotide sugar dehydrogenase VFG0963 Protein 7e-101 56