Gene Information

Name : Sput200_0256 (Sput200_0256)
Accession : YP_006008210.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 275218 - 275937 bp
Length : 720 bp
Strand : +
Note : KEGG: shw:Sputw3181_0251 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver

DNA sequence : 
ATGCCAGCAGCATCCGTGACGATTGGGGAGCGCAACATACAGATGAAAATACTTTTAGTTGAAGATGATGCGACGACGAT
TGATTACATCGTCAAAGGATTTCTTGAGCAGGGGCACAATATCGAAACGGCGAATGATGGCCACCAAGGTTTATCTCTCG
CCACAAGCTGTCAATATGATCTGGTGATCCTCGACCGAATGTTACCCCAGCTTGATGGCTTAAAATTATTGGCGGCTTTA
AGGGCAACGGGTAATCAAACCCCTGTGCTGATTTTGTCGGCTTTAGCCCATGTTGATGAACGGGTTAAAGGTTTGCGGGC
GGGCGGTGATGACTATATGACTAAGCCGTTTGCTTTTTCTGAACTGTTAGTACGCGCTGAAAAACTGATGCAACGTGGTC
AATCCACGCCCATTTCGACCGACTTAGTGGTTGGTGGGCTCAAGATGGAATTACTGACCCGTAATGTGACCTTGGACGGA
CAGGAGTTAATGTTGCAACCTAAAGAGTTTCAGTTGCTTAAGTATTTGATGGAACATGCTAATCAGGTCATCAGCCGCAC
ACTATTATTTGAAGCTGTGTGGGATTATCACTTTGACCCTCGCACCAATGTAATTGATGTACATATTGCAAAATTACGGC
GTAAATTTGAGGAGTTAGGTCACGGAGAGCTTATTGAAACCGTAAGGGGAGCGGGTTATCGCTTACGCCAAAGGCATTAA

Protein sequence : 
MPAASVTIGERNIQMKILLVEDDATTIDYIVKGFLEQGHNIETANDGHQGLSLATSCQYDLVILDRMLPQLDGLKLLAAL
RATGNQTPVLILSALAHVDERVKGLRAGGDDYMTKPFAFSELLVRAEKLMQRGQSTPISTDLVVGGLKMELLTRNVTLDG
QELMLQPKEFQLLKYLMEHANQVISRTLLFEAVWDYHFDPRTNVIDVHIAKLRRKFEELGHGELIETVRGAGYRLRQRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-42 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-41 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sput200_0256 YP_006008210.1 winged helix family two component transcriptional regulator BAC0347 Protein 3e-45 44
Sput200_0256 YP_006008210.1 winged helix family two component transcriptional regulator BAC0083 Protein 1e-41 44
Sput200_0256 YP_006008210.1 winged helix family two component transcriptional regulator BAC0197 Protein 1e-39 43
Sput200_0256 YP_006008210.1 winged helix family two component transcriptional regulator BAC0111 Protein 2e-47 43
Sput200_0256 YP_006008210.1 winged helix family two component transcriptional regulator BAC0638 Protein 2e-38 43
Sput200_0256 YP_006008210.1 winged helix family two component transcriptional regulator BAC0308 Protein 1e-42 42
Sput200_0256 YP_006008210.1 winged helix family two component transcriptional regulator BAC0125 Protein 2e-39 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sput200_0256 YP_006008210.1 winged helix family two component transcriptional regulator VFG0596 Protein 4e-42 45
Sput200_0256 YP_006008210.1 winged helix family two component transcriptional regulator VFG1389 Protein 7e-36 45