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Name : Sput200_2458 (Sput200_2458) Accession : YP_006010371.1 Strain : Shewanella putrefaciens 200 Genome accession: NC_017566 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : - COG ID : - EC number : - Position : 2819661 - 2821751 bp Length : 2091 bp Strand : - Note : TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; KEGG: shw:Sputw3181_1573 DNA topoisomerase III; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain prote DNA sequence : ATGATCCTCTATATCGCAGAAAAACCTAGCCTAGGGCGGGCCATTGCCGATGTATTGCCTAAACCCCATAAAAAAGGCGA TGGATTTATCGAAGCCGCTAATGGCGATTGCGTGTCTTGGTGTGTCGGTCACTTGCTCGAACAAGCAGAACCTGATGCCT ATAATCCTGAATTTAAAGCATGGAAATTTGAGCACTTACCGATAGTGCCAGACAAGTGGCAACTGACACCTAAGGCAGCA ACCCGCAGTCAACTCACTGTGCTTAAACGATTAGTTAAACAAGCGAGTATGCTGGTTAATGCGGGCGATCCCGACCGTGA AGGGCAGTTACTCGTGGATGAAGTGATTGCCTATCTTGGTGTGACGGGGGACAAGCTACATCAAACCCAGCGTTTACTGA TCAGTGACTTAAACCCACAAGCTGTAAAACGGGCTCTAACGCAGCTACGCAGTAATCGCGAATTTATCCCATTATCTACC TCTGCTTTAGCCCGTAGCCGTGCCGATTGGCTCTATGGTATGAATATGACGCGTGCGTACACCATCCAAGGTAAAAAGGT CGGTTATCAAGGCGTGTTATCAGTCGGCCGAGTACAAACGCCATTGCTTGGGCTAGTGGTGCGCCGTGATAAAGAAATTG CTAATTTTCAGTCTAAGCCTTTTTATGAAGTACTGGCACATTTGGCAACGGACAAGCAAGAAACCTTCAGCGCCAAGTGG CAACCGAGTGAAGCTTGTCAGCCTTATATGGATGAAGAAGGACGAGTGTTAGCGAGAGGGTTAGCGCAAAATGTGGTGAG TCGCATCAGCGATAAACCCGCCTTAGTCACTCAATTAGTGGCTAAGGATAAGAAACAGCATCCGCCTTTACCTTACAGTT TATCCGCGTTGCAGATTGATGCGGCTAAACGGTTTGGTATGAGTGCTAAGGATGTGCTCGATACCTGCCAAAGTTTGTAT GAACGTCATAAACTCATTACTTACCCACGCTCCGACAGTCGTTATTTACCCGTTGAGCAACATAATCTTGCGCCTTCGGT ACTTAAGGCGATAAGTGACGGTGCTGCTGAGTTATTGCAAGGTGCTGATGCACCCGATCCCCGTCTTAAATCTAAAGCAT GGGATGATAAAAAAGTGGACGCCCACCACGCAATCGTTCCAACAGAGAAGACGGCTAACTTATCTAGCTTGAGTCAGCGT GAGAGGCAGTTATATCTTCATATTGCCCGCCAGTACTTAGCCCAGTTTTATCCGGCTTATTGTTACAGTGAAACCACAGT GCAAGTGACAATCGAGGGTGGCTTATTTAATACCAAGGCGCGTCAGGATAAATCCCTCGGCTGGAAGCAACTCTTTGCCC GCCAAGAGCCAAATGGCAGTAAGGCGAGTGGCAACAAGTCGACGGAAGAAAGCGCAGGTAAGGATGATGAGGAGCATGAC GAGTTTATTGGCCAATTACCGCCTTTGAAATTGGGGCAAGCTTTGCATTGTACTCGAGGCGAATTGCTTGAAAAAAATAC TCAGCCACCAAAGGCCTTTACCGATGCGACCTTACTCAGTGCGATGACGGGCATTAGTCGTTATGTCACTGACCCTGAGA TCCGTAAAATTCTTAAAGAAACCGATGGATTAGGTACTGAGGCCACCCGTGCAGGTATTATCGAATTGCTATTCAAACGC GGTTTTTTACAACGCCTAGGTAAATCTATTGTCTCGACAGACGTGGGGAAAGGATTGATTAACAGCTTGCCTTTGAGCGC CACTACGCCGGATATGACGGCACTTTGGGAAGCGAGCTTGAACGGCATTTGTCATAAAGAAACCTCCTATCAAGGATTTA TGCAGCCGTTGCTTGGCACCTTATCCACACTTATCCAAAATGCGGGAGCACAACTGCCAACCGCGCTTAATGGTTTACAA GGCCAAGGTTATCGTAAAACAACAGGGAGCAAGTTTGCTTATCGTCAGAAGTCCAGCACAACAAAGCGTAGCGGGAAAGG CGTAAGTACAAAAAAGCCTACAACTAACGCTACCTCTGGTACTCGCTCAAATACTAGGCGTCGAGCAGGTAAGGCAGCCC TTGAGATTTGA Protein sequence : MILYIAEKPSLGRAIADVLPKPHKKGDGFIEAANGDCVSWCVGHLLEQAEPDAYNPEFKAWKFEHLPIVPDKWQLTPKAA TRSQLTVLKRLVKQASMLVNAGDPDREGQLLVDEVIAYLGVTGDKLHQTQRLLISDLNPQAVKRALTQLRSNREFIPLST SALARSRADWLYGMNMTRAYTIQGKKVGYQGVLSVGRVQTPLLGLVVRRDKEIANFQSKPFYEVLAHLATDKQETFSAKW QPSEACQPYMDEEGRVLARGLAQNVVSRISDKPALVTQLVAKDKKQHPPLPYSLSALQIDAAKRFGMSAKDVLDTCQSLY ERHKLITYPRSDSRYLPVEQHNLAPSVLKAISDGAAELLQGADAPDPRLKSKAWDDKKVDAHHAIVPTEKTANLSSLSQR ERQLYLHIARQYLAQFYPAYCYSETTVQVTIEGGLFNTKARQDKSLGWKQLFARQEPNGSKASGNKSTEESAGKDDEEHD EFIGQLPPLKLGQALHCTRGELLEKNTQPPKAFTDATLLSAMTGISRYVTDPEIRKILKETDGLGTEATRAGIIELLFKR GFLQRLGKSIVSTDVGKGLINSLPLSATTPDMTALWEASLNGICHKETSYQGFMQPLLGTLSTLIQNAGAQLPTALNGLQ GQGYRKTTGSKFAYRQKSSTTKRSGKGVSTKKPTTNATSGTRSNTRRRAGKAALEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 1e-102 | 41 |
