Gene Information

Name : Sput200_0222 (Sput200_0222)
Accession : YP_006008177.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 238990 - 240510 bp
Length : 1521 bp
Strand : -
Note : PFAM: Aldehyde Dehydrogenase; KEGG: shw:Sputw3181_0214 aldehyde dehydrogenase

DNA sequence : 
ATGATTTATGCTCAACCCGGAACCGCAGGCGCAATCGTTAACTTCAAAGAAAAATACGCTAACTTTATCGGTGGTAAATG
GATCGCCCCAGTCAATGGCAAATACTTCGACAATCGCTCCCCCGTGAATGGCCAAAACTTTTGCCAAATCCCACGCTCCG
ATGCCCAAGATATTGAATTAGCATTAGATGCAGCCCACGCAGCGAAAGACGCTTGGGGTAAGACCTCAGTCACCGAGCGC
TCAAACCTGTTACTGCGCATTGCCGATCGGGTCGAGCAAAATCTCGAATACTTAGCCGTTGCCGAAACCTGGGAAAACGG
TAAAGCGGTGCGTGAAACCTTAAATGCCGACTTGCCCTTATTCGTCGATCACTTCCGCTACTTTGCGGGTTGTATCCGCG
CACAGGAAGGCAGCGCTGCCGATATCGACGGCAACACAGTCAGCTATCACTTCCCAGAGCCTTTAGGCGTGGTCGGCCAG
ATCATTCCTTGGAACTTCCCGCTCTTAATGGCGGCATGGAAAATCGCCCCTGCGCTGGCGGCGGGTAACTGTGTGGTACT
CAAGCCTGCAGAGCAGACGCCGGTATCGATTTTGGTCTTGCTCGAACTGATTGAAGACCTATTACCCGCGGGTATTCTCA
ATGTAGTCAACGGCTTTGGCGCCGAAGCAGGACAAGCACTGGCCACCAGCAAACGCATCGCTAAACTTGCGTTTACGGGC
TCCACCGAAATTGGCTATCACATTTTAAAATGCGCCGCCGAATCCTTAATTCCATCGACCGTTGAGCTTGGCGGCAAGTC
ACCAAACGTGTTTTTTGCCGATGTGATGGACCATGAGGACGAATATTTAAATAAAGCCGTCGAAGGTATGTTGCTGGCCT
TCTTCAACCAAGGCGAAGTCTGTACTTGCCCATCACGAGTGTTAATCCAAGAGTCGATTTTTGATCGCTTTATCGAAAAA
GTGCTCGCCCGTGCGCAAACCATTAAGCAAGGCGATCCCTTAGATACCGACACTCAAGTGGGCGCTCAAGCCTCTAAAGA
ACAGTTCGATAAGATCTTAAGTTACTTAGCCATAGGTAAGGCTGAAGGTGCAGAAGTGCTATTGGGAGGCACACTTTGCC
AACTCGATGGCGGTCAAAGCGAAGGTTATTACATCAGCCCGACGATTATGAAAGGCCACAATAAGATGCGTATCTTCCAA
GAGGAGATCTTCGGCCCCGTCATTTCGGTCACCACCTTTAAAGATGAAGCCGAAGCCTTAGCGATCGCGAACGATACTGA
GTACGGCCTAGGTGCTGGTGTGTGGACACGGGATATGAACACGGCTCAACGTATGGGACGTGGCATTCAAGCTGGCCGCG
TGTGGATTAACTGTTACCACGCCTATCCTGCCCATGCCGCCTTTGGTGGTTACAAAAAATCCGGCATCGGTCGCGAAACC
CATAAGATGATGCTCAACCATTATCAAAATACTAAGAATCTCTTGGTGAGTTACGATGTGAATCCTTTAGGTTTCTTCTA
A

Protein sequence : 
MIYAQPGTAGAIVNFKEKYANFIGGKWIAPVNGKYFDNRSPVNGQNFCQIPRSDAQDIELALDAAHAAKDAWGKTSVTER
SNLLLRIADRVEQNLEYLAVAETWENGKAVRETLNADLPLFVDHFRYFAGCIRAQEGSAADIDGNTVSYHFPEPLGVVGQ
IIPWNFPLLMAAWKIAPALAAGNCVVLKPAEQTPVSILVLLELIEDLLPAGILNVVNGFGAEAGQALATSKRIAKLAFTG
STEIGYHILKCAAESLIPSTVELGGKSPNVFFADVMDHEDEYLNKAVEGMLLAFFNQGEVCTCPSRVLIQESIFDRFIEK
VLARAQTIKQGDPLDTDTQVGAQASKEQFDKILSYLAIGKAEGAEVLLGGTLCQLDGGQSEGYYISPTIMKGHNKMRIFQ
EEIFGPVISVTTFKDEAEALAIANDTEYGLGAGVWTRDMNTAQRMGRGIQAGRVWINCYHAYPAHAAFGGYKKSGIGRET
HKMMLNHYQNTKNLLVSYDVNPLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-164 70
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 6e-174 69
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 6e-174 69
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 6e-174 69
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 4e-173 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sput200_0222 YP_006008177.1 aldehyde dehydrogenase VFG0082 Protein 5e-165 70