Gene Information

Name : Sput200_2119 (Sput200_2119)
Accession : YP_006010040.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Unknown
Product : class I and II aminotransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2403634 - 2404848 bp
Length : 1215 bp
Strand : +
Note : PFAM: aminotransferase class I and II; KEGG: shw:Sputw3181_2136 aminotransferase AlaT

DNA sequence :
ATGCGCCCTATCATCAAATCCAACAAGCTGGATACCGTTTGCTATGACATCCGCGGCCCAGTGCACAAGGAAGCCAGACG
TTTAGAAGACGAGGGGCATCGAATCCTCAAACTCAACATTGGTAATCCGGCCCCCTTCGGTTTCGAAGCGCCTGAAGAAA
TTGTGCGCGATGTGATCCTCAATTTACCCAGTGCCCAAGGCTACTGTGAGTCAAAAGGATTATTCTCTGCCCGTAAGGCC
ATAGTGCAGCATTATCAAGCCCAAGGGATTTTTGGTGTCGATATCGAAGATATCTATATAGGCAACGGCGTTTCAGAACT
CATTATGATGGCAATGCAAGGCTTGCTAAATACCGATGATGAGATCTTAATCCCCTCACCAGACTATCCCCTGTGGACGG
CTGCGGCGAATCTCGCGGGCGGCAAAGCGGTACATTATCGCTGCGATGAAGAAGCAGACTGGTTCCCCGATCTCAACGAC
ATTAAAAGCAAAATCTCATCACGTACCCGCGGCATAGTGCTGATTAACCCAAACAACCCAACGGGAGCGGTATACAGTAG
AGAATTACTGCTGCAAGTGGTTGAACTGTGCCGTCAACATGATCTGATCCTATTTGCCGATGAAATTTACGACAAAATTT
TATACGATGAAGCCAAACATATTCCTGCAGCAGGTTTATCAGACGATATTTTAACTGTTACGTTTAACGGTTTATCAAAG
GCTTATCGTGCAGCAGGATTTCGTGTCGGTTGGATGATGTTATCTGGCAATCTTAAGGCTGCTAAAAGTTACATCGAAGG
CTTAGAAATGCTGTCCTCGATGCGCCTTTGTGCAAACGTGCCCAATCAACATGCGATTCAAACCGCGCTTGGCGGTTACC
AAAGCATTAACGAGCTTATTTTGCCTAATGGCCGCCTTACGGTTCAACGGGATGCTTGTTATGAATTGCTTAACCAAATC
CCCGGCGTGAGCGTGAAAAAACCAAAGGGTGCACTCTATGCCTTCCCCAAATTGGATATGAAAAAATTCAATCTGCGAGA
TGATGAGCGTTTAGTGCTGGATTTACTCAGGGAAAAGAAAATTCTGTTAGTCCATGGTAGCGCCTTTAACTGGCCAGAGC
CCGACCATTTGCGAGTGGTTTTCTTACCCTATAAAGAAGATCTCAACAAAGCGCTGACCGAGTTTGGTGACTTCCTCGAA
AACTATCGACAGTAG

Protein sequence :
MRPIIKSNKLDTVCYDIRGPVHKEARRLEDEGHRILKLNIGNPAPFGFEAPEEIVRDVILNLPSAQGYCESKGLFSARKA
IVQHYQAQGIFGVDIEDIYIGNGVSELIMMAMQGLLNTDDEILIPSPDYPLWTAAANLAGGKAVHYRCDEEADWFPDLND
IKSKISSRTRGIVLINPNNPTGAVYSRELLLQVVELCRQHDLILFADEIYDKILYDEAKHIPAAGLSDDILTVTFNGLSK
AYRAAGFRVGWMMLSGNLKAAKSYIEGLEMLSSMRLCANVPNQHAIQTALGGYQSINELILPNGRLTVQRDACYELLNQI
PGVSVKKPKGALYAFPKLDMKKFNLRDDERLVLDLLREKKILLVHGSAFNWPEPDHLRVVFLPYKEDLNKALTEFGDFLE
NYRQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 1e-111 58
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 1e-111 58
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 1e-111 58
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 1e-111 58