|
Name : Sput200_2002 (Sput200_2002) Accession : YP_006009924.1 Strain : Shewanella putrefaciens 200 Genome accession: NC_017566 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : 6.1.1.11 Position : 2283924 - 2285210 bp Length : 1287 bp Strand : + Note : TIGRFAM: seryl-tRNA synthetase; KEGG: shw:Sputw3181_2005 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : ATGTTAGATCCTAAATTTTTACGCAACGAATTAGCTGTTACCGTGGAGCGATTGGCCACTCGAGGCTTTATTTTAGATGT CGCTCATCTTACTCAATTAGAAGAAAAACGTAAGTCGTTGCAAGTGGCTACTGAAGAATTGCAAGCGGCGCGTAATGCCA TCTCTAAATCCATCGGACAAGCCAAAGCCCGCGGTGAAGATGTTGACTCGATCATGGCACAAGTGGGGGATTTAGGCTCT CAACTCGATGCAAAAAAATTAGAGCTAGCAGCTGTATTGGAAGAAGTGAATGCGATTGCGATGTCCATGCCTAACCTGCC AGATGAATCTGCGCCAATTGGTGCCGATGAAACACAGAATGTCGAAGTACGCCGTTGGGGCACACCACGTAGTTTTGATT TCCCGATCAAAGATCATATTGACTTGGGCGAAGGCTTAAACGGTTTAGATTTTAAAAGCGCGGTTAAGATCACCGGCTCT CGTTTTATCGTAATGAAAGGTCAAATAGCCCGATTAAATCGCGCCTTAGGTCAGTTTATGTTGGATCTGCATACGACTGA GCATGGTTATACCGAAGCCTATGTGCCATTGCTGGTTAATGAAGCGAGTTTACTTGGCACAGGCCAATTGCCGAAGTTTG GTGAAGACTTATTCCATACCAAACCCGCCACCGAAGAAGGTCAAGGGTTAAGTTTGATCCCTACAGCAGAAGTGCCACTC ACTAACTTAGTGCGTGACAGTATAGTCGATGAAGACGAGTTACCGATTAAGCTAACAGCACATACCGCATGTTTCCGAAG CGAAGCAGGATCATACGGCAAAGATACCCGTGGTCTTATTCGTCAGCATCAATTCGATAAAGTTGAACTCGTTCAATTAG TCAAACCAGAAGACTCAATGGCTGCACTTGAAACGCTGACAAATCATGCCGAAACCGTACTGCAACGCTTAGGACTACCA TATCGTACAGTTGTGTTATGTACGGGTGATATGGGTTTTGGCTCAAGCAAGACTTATGACATCGAAGTCTGGTTACCTGG ACAAAATACCTACCGTGAAATTTCTTCTTGCTCAAACATGAAGGATTTCCAAGCCCGCCGTATGCAAGCGCGTTACCGTG TTAAAGCGGATAATAAACCCGCTTTGTTACACACATTAAATGGCTCTGGTTTGGCTGTTGGCCGTACCTTAGTAGCGATA TTAGAAAACTATCAGAATGCTGATGGCAGTGTGACTATACCAGAAGCATTGCGTTCTTATATGGGTGGATTAACTCAAAT CGGTTAA Protein sequence : MLDPKFLRNELAVTVERLATRGFILDVAHLTQLEEKRKSLQVATEELQAARNAISKSIGQAKARGEDVDSIMAQVGDLGS QLDAKKLELAAVLEEVNAIAMSMPNLPDESAPIGADETQNVEVRRWGTPRSFDFPIKDHIDLGEGLNGLDFKSAVKITGS RFIVMKGQIARLNRALGQFMLDLHTTEHGYTEAYVPLLVNEASLLGTGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPL TNLVRDSIVDEDELPIKLTAHTACFRSEAGSYGKDTRGLIRQHQFDKVELVQLVKPEDSMAALETLTNHAETVLQRLGLP YRTVVLCTGDMGFGSSKTYDIEVWLPGQNTYREISSCSNMKDFQARRMQARYRVKADNKPALLHTLNGSGLAVGRTLVAI LENYQNADGSVTIPEALRSYMGGLTQIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-109 | 56 |
