Gene Information

Name : Sput200_1883 (Sput200_1883)
Accession : YP_006009805.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2130453 - 2131190 bp
Length : 738 bp
Strand : -
Note : KEGG: shw:Sputw3181_1884 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase

DNA sequence :
ATGAACGTGATTCTGTTAATCCCAGCGCGTTACGGCTCTAGCCGCTTCCCAGGCAAGCCATTGGCACCGATTAACGGTAA
GCCAATGATCCAGCACGTGTATGAACGTGCATCGTTAGCAAAAGGTCTCACGAATATTTATGTTGCTACCGATGACGAAC
GTATCAAAGCGACCGTTGAAGGATTTGGTGGCAAAGTGGTGATGACCAGCCCAGATGCCGCATCGGGAACTGATCGTATC
AATGAAGCGATCAAACTGCTGGGATTGAAAGATGATGATTTAGTGATCAACGTACAGGGCGATCAACCCCTGATTGATCC
CACGGCTATCGAGCAACTGATCAACCTATTCGAACGTCAACCGGGTGAGTTTGAAATGGCAACCCTAGGCTATGAAATCG
TCAACAAAGCCGACATTGATGACCCAATGCAAGTAAAGATGGTCTTTGATAACAACTACTATGCCTTGTATTTCTCCCGC
TCGCGTATTCCCTTTGGCCGCGATACCCAAGATTATCCTGTTTTTAAGCATTTAGGGATTTACGCTTATACAAGCAAATT
TGTACAAACCTTCGCCGCGCTGCCATTAGGCCGCCTTGAAGATCTAGAGAAACTCGAGCAATTACGCGCTTTAGAACATG
GTCATAAGATCAAAATTGCCATCAGCGCCTCTAATTCTCTTGAAGTCGATAGACCAGAAGATATCCACAAATGTGAGCAG
CGTTTAGCGGCAGGTTAA

Protein sequence :
MNVILLIPARYGSSRFPGKPLAPINGKPMIQHVYERASLAKGLTNIYVATDDERIKATVEGFGGKVVMTSPDAASGTDRI
NEAIKLLGLKDDDLVINVQGDQPLIDPTAIEQLINLFERQPGEFEMATLGYEIVNKADIDDPMQVKMVFDNNYYALYFSR
SRIPFGRDTQDYPVFKHLGIYAYTSKFVQTFAALPLGRLEDLEKLEQLRALEHGHKIKIAISASNSLEVDRPEDIHKCEQ
RLAAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 2e-41 43
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 2e-41 43
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 2e-41 43