|
Name : Sput200_1782 (Sput200_1782) Accession : YP_006009705.1 Strain : Shewanella putrefaciens 200 Genome accession: NC_017566 Putative virulence/resistance : Resistance Product : bile acid/detergent exporter permease component, VexD Function : - COG functional category : - COG ID : - EC number : - Position : 2022802 - 2025837 bp Length : 3036 bp Strand : - Note : PFAM: acriflavin resistance protein; KEGG: saz:Sama_1716 AcrB/AcrD/AcrF family transporter DNA sequence : ATGAGCATTGCAGCCTATTCAATAAAGAAAAGGAATAGCCTTTGGGTTATGATCTTTCTGCTATTAATTGGAGGTTTTAT CAGCTACAAGGGGTTAGGAAGATTCGAAGACCCTGAATTTATTATTCGACAAGCAGTCATTATTACTCCCTATCCAGGCG CTTCAGCTGTTGAAGTTGCAGATGAAGTTACTGAAGTGATTGAAACAGCTGTGCAGTCTTTACAAGAACTCAAAGAAGTT AAATCCATTTCTAAACAAGGGAGTTCAGAGGTTACCGTAGAAATCAAACTCGATTTTTCGAAAACGAAAGCTGAACTAGA CCAAGTTTGGGATAAGCTGCGGCGAAAAGTATCGGATGCACAAAGGAATCTCCCCAGCGGGGCCGGTCCTTCATTTGTGA ATGATGATTTTGCAGATGTCTATGCCCTCTTTTACGCCATAACGGGTCAAGGTTATACCGATAAGCAGCTCAATGACTAT GTTAAGTTTTTGCAGAAGGAACTGGCATTAGTAAAAGGTGTCGCGAAGACAGCTACTTTAGGCACAAAATCAGAACAAAT CTTTATTGAGCTTTCTTCAGAACGTTTGCAACAGTATGGTATGAGCCTTGAGCAGGTATATCAAACACTGAAAAACCAGA CATTAGTTACCTTGGCAGGAGACCTTGAACTCGATGGTATGCGTATTCCTGTGCTCCCTAATAATACAGTATTGACTATT GATGACTTAAAAAAGCTAAAAATAGGTATCAATACAAATGGCAACTTATTACAACTCAATCAGATTGCACATATCTATAA GGGATATAAAGAGCCAGCCAGTGTTTTAATGACATACAACGGTCAACATGCTATCGGCTTGGGCATTTCTAATGTTTCTG GTGGAAATGTGGTTGAAATGGGTGATGCTGTTAAGCAGCGTTTATCCGAACTTGAATCACAACGTCCCTACGGCATGGAA CTGAATGAAATCTCGATACAATCCGATTCAGTTCGAGCATCTGTTGCTAACTTTGTTGATAACCTTATCGCAGCAGTCGT AATTGTATTTCTAGTGTTATTAGTCTTTATGGGAGTGAGATCAGGCATCATTATCGGTTTTGTTTTATTGTTAACCGTCG CAGGTACATTAATTATCATGTTGATTGATGATATCGCCATGCAACGGATATCACTTGGTGCCTTAATTATTGCGCTTGGC ATGTTAGTCGATAATGCCATTGTGGTAACTGATGGCGTATTAGTGCGTCTACAAAAAGGACAAGAGAAACTCACTGCAAT AAATGAGGTAGTAAATTCAACCATTTGGCCACTGCTCGGTGGCACTGTAGTGGGTATACTTGCTTTTAGTGCAATCGGTT TGTCCCCAAGTGATATGGGTGAATATGCAGGTTCCCTTTTCTGGGTAATTTGCTACTCAATGTTTTTAAGCTGGTTGTTT GCTATCACTATTACCCCTCTTTTGTGCTATCAATTTTTAAGTGTTGATAACAATAAAACAGCAGCTAAAGAAAGCCGTAT TTTAGCTTTTTATTACAAAATTCTTATCTTGGTTTTACGTAATAGATTAGTCTCCGGTGCAGTATTGCTTGGGTTGTTAG TGCTCGCCGTTGCGAATATGGGGCGAATACCACCTGGTTTTATGCCGGAATCACAAAGAGCTCAATTTGTCGTTGATGCA TTTTTACCTCAAGGCACTGATATCAGTAAGACCAGCAATATAATGGTAAACATGAGCCAGCTTGTTAAGCAGAAGGAGCA CATTACCAATGTAACATCTTTCATTGGCAGTGGTGGCTTGAGGTTTATGTTAAGTCATGCCCCTGAGCCAAGAAATTCAG CCTATGGTCAATTGTTGATAGATGTTGATGATTACAGAAACATCAATAAATTAGTTGACGAGTTACAAACCGAATTGTCG CAACAGTTTCCCAATGCATCGATTAAAGTGTGGAAGTTTATGCTTGGCCGCGGTGGCGGTAAGAAAATAGAGGCGGGATT TTCAGGGCCTGATCCTAAAGTACTCAGAGCGCTTGCAGAAGAAGCCAAAGCACTCATGAACTCTGATAATAATCTGATAG CTGTTCAGGATGATTGGCGCCAACAAATCCCGGTCATCAAACCCCATTACCTACCAGAGATAATGCAACAACAAGGCTTA ACCGCAAGAGACCTAAATCAAGCTATCGCTCAATCATTAAATGGACGGCAAATCGCACAGTTCCGCCAGAATGACGAGCT TATTCCGGTTGTGGTAAGAGCCCCAGAAAATGAGCGGAGACATGATAGGGTCATTGAAAATATCAGTGTATACAGTAATC AAAGTCAGGCTTTCGTCCCGATTAGTCAATTCGTTTCTGATGTAGGCCTCGAATGGGAAGACTCCTTAATCCGTAAAATC AACCGTATGCCGACTATTCTTGCACAAGCGGATCCTGCGCCAGGCGTTTTAGCAAGTGATGCTTTCAATAGTATTAGGCA TAAAATCGAGCAAATCGCGTTACCTGATGGTTATCAGTTGACTTGGTATGGCGAATATAAAGCCTCAAACGATGCCAATG AAGGGATAGCCATTTCTGCGCCTTATGGATTTGCAGCAATGATCTTAGCGGTCATTTTTATGTTTAATGCCTTCAAACAA CCCATCGTTATTTGGATGACAGTACCGCTGGCTGTGATTGGTGTTGTCGTAGGGTTAATCATATTTCAAACCCCCTTTGA ATTTATGGCAATCTTGGGCTTTTTAAGCTTGATAGGCATGATGGTCAAAAATGCCATTGTACTGGTTGATCAGGCTGATA ATGATATTCGAGAAGGAACAACACCCTTTGATGCCGTGGTCGGGGCCGCCCTGAGCCGTGCTAAACCTGTAGTATTAGGT GCTGCAACCACGATTATGGGCGTAGCTCCCCTACTTTTAGATCCCTTCTTCAAAAGCATGGCAGTCACCATCATGTTCGG ATTGTTGTTTGCAACAGTATTGACGCTGATTGTGATCCCGTTGCTCTATGCCGTGTTATTTAGAATCCAAAGATAA Protein sequence : MSIAAYSIKKRNSLWVMIFLLLIGGFISYKGLGRFEDPEFIIRQAVIITPYPGASAVEVADEVTEVIETAVQSLQELKEV KSISKQGSSEVTVEIKLDFSKTKAELDQVWDKLRRKVSDAQRNLPSGAGPSFVNDDFADVYALFYAITGQGYTDKQLNDY VKFLQKELALVKGVAKTATLGTKSEQIFIELSSERLQQYGMSLEQVYQTLKNQTLVTLAGDLELDGMRIPVLPNNTVLTI DDLKKLKIGINTNGNLLQLNQIAHIYKGYKEPASVLMTYNGQHAIGLGISNVSGGNVVEMGDAVKQRLSELESQRPYGME LNEISIQSDSVRASVANFVDNLIAAVVIVFLVLLVFMGVRSGIIIGFVLLLTVAGTLIIMLIDDIAMQRISLGALIIALG MLVDNAIVVTDGVLVRLQKGQEKLTAINEVVNSTIWPLLGGTVVGILAFSAIGLSPSDMGEYAGSLFWVICYSMFLSWLF AITITPLLCYQFLSVDNNKTAAKESRILAFYYKILILVLRNRLVSGAVLLGLLVLAVANMGRIPPGFMPESQRAQFVVDA FLPQGTDISKTSNIMVNMSQLVKQKEHITNVTSFIGSGGLRFMLSHAPEPRNSAYGQLLIDVDDYRNINKLVDELQTELS QQFPNASIKVWKFMLGRGGGKKIEAGFSGPDPKVLRALAEEAKALMNSDNNLIAVQDDWRQQIPVIKPHYLPEIMQQQGL TARDLNQAIAQSLNGRQIAQFRQNDELIPVVVRAPENERRHDRVIENISVYSNQSQAFVPISQFVSDVGLEWEDSLIRKI NRMPTILAQADPAPGVLASDAFNSIRHKIEQIALPDGYQLTWYGEYKASNDANEGIAISAPYGFAAMILAVIFMFNAFKQ PIVIWMTVPLAVIGVVVGLIIFQTPFEFMAILGFLSLIGMMVKNAIVLVDQADNDIREGTTPFDAVVGAALSRAKPVVLG AATTIMGVAPLLLDPFFKSMAVTIMFGLLFATVLTLIVIPLLYAVLFRIQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0395_A1355 | YP_001217299.1 | AcrB/AcrD/AcrF family transporter | Not tested | VPI-2 | Protein | 0.0 | 69 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Sput200_1782 | YP_006009705.1 | bile acid/detergent exporter permease component, VexD | BAC0425 | Protein | 0.0 | 69 |
| Sput200_1782 | YP_006009705.1 | bile acid/detergent exporter permease component, VexD | BAC0519 | Protein | 9e-178 | 42 |
| Sput200_1782 | YP_006009705.1 | bile acid/detergent exporter permease component, VexD | BAC0526 | Protein | 2e-177 | 41 |
| Sput200_1782 | YP_006009705.1 | bile acid/detergent exporter permease component, VexD | BAC0428 | Protein | 5e-177 | 41 |
