Gene Information

Name : Sput200_1641 (Sput200_1641)
Accession : YP_006009567.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Unknown
Product : IS10A transposase, TnpA_IS10A
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1857073 - 1858281 bp
Length : 1209 bp
Strand : -
Note : PFAM: transposase IS4 family protein; KEGG: shw:Sputw3181_3852 transposase, IS4 family protein

DNA sequence :
ATGCGCGAAGCCAATATCCTACAACATTCTTTACACCAATACTGCCCAGAACTTCACCTAAAACGATTAAACAGCTTGAT
GCTGGCCTCTAAGGCACTGATTGAATGTAAGACACTGACCTTGACTGAGTTAGGTCGAAATTTACCAACCACGGCCCGAA
CCAAGCACAACATCAAGCGCATTGATCGTTTGCTCGGCAACACGCATCTGCATCAAGAACGGTTAGCTGTCTACCAATGG
CATGCCAGCCTCATCTGTTCTGGTAACCCTATGCCGATTGTGCTCGTCGATTGGTCAGACATCCGAGAGCATAAACGCAT
CATGGCTCTGCGCGCCTCAATAGCCTTCAATGGCCGCTCTATTACCCTGTATGAGAAGTCCTATCCCCTATCAGAACAAT
GCTCTAAGGCCTCCCACAACGGTTTTTTAGCGGACTTAGCCAAGATTTTACCTTTGCATGTTACCCCTCTCATCGTGACT
GACGCGGGGTTCAAAGTGCCTTGGTACAAAGAGGTTGAGGCGCATGGTTGGTTTTGGCTAAGCCGTATTCGCGGTACAGT
TCAATTTGCAGATATTGGCGCTGAAAATTGGCGTGCAGTTCGCAGTACACATGACTTGGCCAACGGTCAAGCGAAGAGCC
TGGGTTGTAAGACCTTGACCAAAACTAACCCTATCAATTGCCATCTCACGCTTTATCGTAGCAAACCTAAGGGGCGTACA
AATCAGCGTTCAACGAGGACTAATTGCCACCATCCATCGGCAAAAACGTACTCAACATCGGCGAAAGAGCCTTGGGTGTT
AGCCAGCAATTTACCACCAGAATCTCGGAGCCCAAAGCAGCTGGTAAACCTGTACGCCAAACGTATGCAAATAGAGGAAA
CCTTTCGTGACCTCAAAAGCCCGGCATACGGCTTTGGCTTACGCCAAAGTCGTACCAACAGTCCAGAGCGATTCGACATC
ATCCTACTGATAGCGTTGATGGTTCAATGCCTGTTGTGGCTAGTTGGTTTACACGCACAGCAACAGGGCTGGGATAAGCA
TTTTCAGGCCAATACCATTGGGCATCGAACGGTACTCTCAACGATTCGCTTGGGATTGGAGGTACTCAGGCGGCCTGATT
ATCAAATCACGGAGAAAGAATTGCTGGCGGCCTGGGTATTATTCGCCAATCAGTTGCTCAAATATGGCTATGCTATGGCT
GATTTATGA

Protein sequence :
MREANILQHSLHQYCPELHLKRLNSLMLASKALIECKTLTLTELGRNLPTTARTKHNIKRIDRLLGNTHLHQERLAVYQW
HASLICSGNPMPIVLVDWSDIREHKRIMALRASIAFNGRSITLYEKSYPLSEQCSKASHNGFLADLAKILPLHVTPLIVT
DAGFKVPWYKEVEAHGWFWLSRIRGTVQFADIGAENWRAVRSTHDLANGQAKSLGCKTLTKTNPINCHLTLYRSKPKGRT
NQRSTRTNCHHPSAKTYSTSAKEPWVLASNLPPESRSPKQLVNLYAKRMQIEETFRDLKSPAYGFGLRQSRTNSPERFDI
ILLIALMVQCLLWLVGLHAQQQGWDKHFQANTIGHRTVLSTIRLGLEVLRRPDYQITEKELLAAWVLFANQLLKYGYAMA
DL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
IS1999 CAJ77042.1 Insertion sequence Not tested AbaR1 Protein 0.0 100
tnp AEA34664.1 IS10 transposase Not tested Not named Protein 2e-145 72
IS10 CAI43894.1 transposase for IS10 Not tested LEE Protein 8e-146 72
tnp AEA34674.1 IS10 transposase Not tested Not named Protein 3e-144 71
SF2983 NP_708757.1 iso-IS10R ORF Not tested SHI-1 Protein 1e-144 71

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sput200_1641 YP_006009567.1 IS10A transposase, TnpA_IS10A VFG0647 Protein 6e-145 71