Gene Information

Name : Sput200_1519 (Sput200_1519)
Accession : YP_006009448.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Resistance
Product : methionine gamma-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1723401 - 1724594 bp
Length : 1194 bp
Strand : +
Note : KEGG: shw:Sputw3181_2594 methionine gamma-lyase; TIGRFAM: methionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein

DNA sequence :
ATGCAAGATGAGTCAGGCAAGATGTGGAAAGCTGCAACACAGGTTATTCATGGCGGCCATGAGCATGAGGCCTTTGGCGC
CTTAGTGACGCCGCTTTATCAAAGTGCGACTTTTGTGTTTGAGTCTGCACAGCAAGGTGGCGAGCGATTTGCGGGTAATG
AGCCGGGGTATATTTACACGCGCTTAGGGAATCCGACAACCGCCGAGCTTGAACGTAAAATGGCGATTTTAGAAGGGGCA
GAGGCCGCCGCCGCAACCGCTTCTGGCATGGGCGCAGTATCCGCCGCATTACTGGCTAACTTGCAGATGGGCGATCACTT
AGTGGCATCCAATGCGGTATACGGCTGTACTTTTGCGCTAATGACGTCTCAGTTCGCCCGCTTTGGTATCGAAGTGTCCC
TAGTGGACTTTTCATCGGTAACAGAAATAGAAGCAGCGATTAAATCCAATACTAAGGTCATTTTCTGTGAAACCCCAGTC
AACCCCCATTTACAGGTGTTTGATTTGGCGGCAATTGCGACTATTGCCAAACGTCATAAGCTAGTGAGTATTGTCGACAA
TACCTTTATGACGCCATTACTGCAGAGACCACTCGATTGGGGTATCGATTTGGTGATCCACAGTGCGACTAAATATCTGA
ATGGCCATGGTGATGTGATTGCGGGGATAGTGTGTGGCAGTGACGAACAGATCCATAGAGTTAAGTATGAAATCTTAAAA
GATATTGGCGCGGTAATATCGCCACACGATGCTTGGCTGATCTTGCGTGGTCTTAAAACCTTAGATGTGCGTTTACAGCG
ACATTGCGATAGTGCTCAGCGTGTGGCGGAGTTTTTGGCGGAACATCCAAGCATTACACGTGTGTATTATCCCGGGCTTG
CCTCTCATCAAGGGCATAAATTTATGGGTAAGCAGATGAAACGTGCTGGTGGTGTTATCGCGTTTGAACTGGCGGCAAAT
TTAGAAGAGGCCATGGCCTTTGTCGGATATCTAAAGTTGTTCTCTATTGCGGTGAGCCTAGGGGATGCTGAATCTCTTAT
TCAACATCCAGCATCGATGACGCATTCACCTTATACGCCAGAGGCAAGGGCTGCCGCTGGAATTGGTGATAATCTGCTAC
GGATCTCTATCGGCTTAGAGGATTGTGACGACATCATCGCCGATTTGAATCAAGCACTAGTGCGTTTGACTTAA

Protein sequence :
MQDESGKMWKAATQVIHGGHEHEAFGALVTPLYQSATFVFESAQQGGERFAGNEPGYIYTRLGNPTTAELERKMAILEGA
EAAAATASGMGAVSAALLANLQMGDHLVASNAVYGCTFALMTSQFARFGIEVSLVDFSSVTEIEAAIKSNTKVIFCETPV
NPHLQVFDLAAIATIAKRHKLVSIVDNTFMTPLLQRPLDWGIDLVIHSATKYLNGHGDVIAGIVCGSDEQIHRVKYEILK
DIGAVISPHDAWLILRGLKTLDVRLQRHCDSAQRVAEFLAEHPSITRVYYPGLASHQGHKFMGKQMKRAGGVIAFELAAN
LEEAMAFVGYLKLFSIAVSLGDAESLIQHPASMTHSPYTPEARAAAGIGDNLLRISIGLEDCDDIIADLNQALVRLT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 8e-63 42
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 1e-61 42
metB YP_281510.1 cystathionine beta-lyase Not tested Not named Protein 2e-57 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Sput200_1519 YP_006009448.1 methionine gamma-lyase BAC0207 Protein 9e-82 51