Gene Information

Name : Sput200_1395 (Sput200_1395)
Accession : YP_006009327.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Unknown
Product : ISSod4 transposase, TnpA_ISSod4
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1575044 - 1576246 bp
Length : 1203 bp
Strand : -
Note : PFAM: transposase mutator type; KEGG: son:SO_A0144 ISSod4, transposase

DNA sequence :
ATGACCCAACCTTTTAACTTCGAACAAGCCCTTAAAGATCTGCAATCAGGTAAAAGCCTCACAGGTAAAGACAGCATTCT
TGGTCCACTGATCAAGCAACTCACTGAAGCGGCTCTCCAGGCTGAGCTTGAGCAGCATTTAGCGCATGATCCTCAGCCTA
ATCGTAAAAATGGCAAAACCCCTAAGACCATTAAGCATCCGTCCGGTAACTTTGAGTTAGACGCTCCTAGAGACCGCAAT
GGCACCTTTGAGCCTCAGTTGATTAAGAAAAATCAAACTACGCTAACCGATGAAATCGAACGTAAAGTGTTATCGATGTT
CAGTATAGGTATGAGCTATCGCGATATTAATCAACATGTTGAAGATATGTATGGGATCAATGTGTCTAACGCAACAGTAA
GTGCTATCACTGACAAACTCATCCCCGAACTTAAAGCGTGGCAACAGCGCCCATTAGATAGCCATTATCCTATCGTTTGG
CTTGATGCGATACATTATAAAGTCAAAGAGGATGGGCGTTACGTCAGTAAAGCCGTTTACACATTGTTAGCGCTTAATAT
GAAAGGAAAAAAGGAAATTTTAGGGCTTCACTTATCCGAAAATGAAGGCGCTAATTACTGGCTATCCGTACTGACCGATC
TTAATAATCGTGGCGTAAAAGATATTCTTATCGCCTGTGTTGACGGCTTGACCGGTTTCCCTGAGGCCATAGCCAGTATC
TTCCCTAATACGGAAACACAGCTATGCGTTATCCACCAGATCCGCAACTCAATGAAGTATGTCGCCTCAAAAAATCAGAA
AGCGTTTATGGCTGATTTAAAGCCTGTGTATCGAGCCGTGAGTAAAGAAGCCGCAGAGATGGCATTGGACGAACTGGAGG
CCAAATGGGGTGATGCTTATCCGCTGGTAATCAACTCTTGGCGTCGCAAATGGCATAATTTGTCCCATTATTTTAAGTAC
CCAGAACATATCAGGAAAGTGATTTACACCACCAATGCAGTTGAGGCTGTACATCGCCAATTTAGAAAGCTCACCAAAAC
CAAAGGTGCTTTTCCGAATGAAAATAGCTTGTTGAAGCTACTTTACGCAGGCATATTAAACGCCTCAGATAAATGGACCA
TGCCAATCCACAATTGGAGCCTTTGTTTATCTCAGTTAGCGATTTATTTTGAAGGACGTTTAGATAGCGTGCTAGAAATT
TAA

Protein sequence :
MTQPFNFEQALKDLQSGKSLTGKDSILGPLIKQLTEAALQAELEQHLAHDPQPNRKNGKTPKTIKHPSGNFELDAPRDRN
GTFEPQLIKKNQTTLTDEIERKVLSMFSIGMSYRDINQHVEDMYGINVSNATVSAITDKLIPELKAWQQRPLDSHYPIVW
LDAIHYKVKEDGRYVSKAVYTLLALNMKGKKEILGLHLSENEGANYWLSVLTDLNNRGVKDILIACVDGLTGFPEAIASI
FPNTETQLCVIHQIRNSMKYVASKNQKAFMADLKPVYRAVSKEAAEMALDELEAKWGDAYPLVINSWRRKWHNLSHYFKY
PEHIRKVIYTTNAVEAVHRQFRKLTKTKGAFPNENSLLKLLYAGILNASDKWTMPIHNWSLCLSQLAIYFEGRLDSVLEI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 2e-82 49
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 9e-84 46