Gene Information

Name : Sput200_1300 (Sput200_1300)
Accession : YP_006009237.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Unknown
Product : putative exonuclease RdgC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1460806 - 1461720 bp
Length : 915 bp
Strand : -
Note : PFAM: putative exonuclease RdgC; KEGG: shw:Sputw3181_2809 recombination associated protein

DNA sequence :
ATGTGGTTTAAAAATCTTACTCTTTATCGTTTTAATAAACCTTTTGCCGTCGAAACTGAAGCACTTGAAACCGCACTTGC
AGATTTCACTTTCTCCCCATGCTCAAGCCAAGACATCAGTAAATTTGGGTTTTCCAATGCCTTAGGAAAAAAAGGCAGTT
CCTTGGTGCATAGTGCCAACAATCGCCATTTAATTTGTGTGACTAAAGAAGAAAAAATGCTCCCAGGCCAAGTCATCAAG
GAAGCACTTGAAGAAAAAGTGGCTCTCATTGAGGATGAAGAAAATCGAAAACTGGCAAAAAAAGAAAAAGATGCTCTTAA
AGATGAAATTATCACCAGTTTGTTACCACGGGCATTTTCACGCCGTAGCCAGACTCGCGCACTGATTTTACCTGAACTTG
AAATGATCCTCGTTGATAGTTCAAGTGCCACTAAGGCCGAAGAATTATTAGCGTTATTACGTAAATCTCTCGGCAGTTTG
CCAGTGATCCCCTTAAGTTTTAAAGCGCCTGTTGAGTCCCATTTAACCGAATGGTTAAAGAATGGCAGTGCACCATTACC
CTTTGAAATGCAAGATGAAGCAGAGCTTAAATCAGAAGCAGATGAAGGTGGCATTGTACGTTTTAAGCAACAGGATCTAA
AAGAAGATGAAGTGCTCGCTCACTTAGCGACGGGCAAACAAGTTCATAAATTAGCCCTGCACTTTGGTCAATCTATCGCG
CTATTGCTGCAATCGGATGCTAGCGTGAAACGTCTTAAATTCTCTGAAGAATTTAGAGCGGGGAACGATGAAGTCGGTAC
TGATGATCCTATGGCACGTTTAGATGCTGATTTTGCATTAATGGGTAGCGAGTTAGTTGCCTTAATGCACGCACTTGTAT
CAGCCCTTGGCGGACTAGAAGAAACACAAGACTAA

Protein sequence :
MWFKNLTLYRFNKPFAVETEALETALADFTFSPCSSQDISKFGFSNALGKKGSSLVHSANNRHLICVTKEEKMLPGQVIK
EALEEKVALIEDEENRKLAKKEKDALKDEIITSLLPRAFSRRSQTRALILPELEMILVDSSSATKAEELLALLRKSLGSL
PVIPLSFKAPVESHLTEWLKNGSAPLPFEMQDEAELKSEADEGGIVRFKQQDLKEDEVLAHLATGKQVHKLALHFGQSIA
LLLQSDASVKRLKFSEEFRAGNDEVGTDDPMARLDADFALMGSELVALMHALVSALGGLEETQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 3e-46 44