Gene Information

Name : Sput200_1236 (Sput200_1236)
Accession : YP_006009173.1
Strain : Shewanella putrefaciens 200
Genome accession: NC_017566
Putative virulence/resistance : Virulence
Product : UspA domain-containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1374550 - 1375404 bp
Length : 855 bp
Strand : +
Note : PFAM: UspA domain protein; KEGG: shw:Sputw3181_2919 UspA domain-containing protein

DNA sequence :
ATGACAAATGTGATTGCCTGTATTGACGGTTCAAGAGCTACACTGGCCGTATGTGATGCCAGTGGTTGGGCCGCCTTGCA
ACTGGATTCCCCTGTAATCCTATTACATGTATTGGATAAGTCAGCCTATCCGATAGAGTCAGATCTGTCGGGAAATATTG
GCCTAGGTACACGGGAGCACTTGCTCAATGAAATGGTTGAGCTTGAAGCGCGCCGGGGCAAGCTGGCACTCGAGCAGGGT
AAGTATATGTTGCAGGATGCGCAAACGCGCATCGTGGAGACACAACCCGCTGTCGTGGTTGAAACCTTGCAGCGTCACGG
CGATTTAGTCGAAACCCTGTTAGAGCAAGAATCCCAGGCCAGACTGGTGGTGATGGGGCGCCAAGGGGAGCAGCATCAAG
ATCAGACGCAGGCCATTGGCAGCCACTTAGAAAATGTTGTTCGTACGCTTAAGCAACCTATTTTAGTGGTGATGGACGAG
TTTACTGCACCGACTCGATTTATGATCGCCTATGATGGCAGTGTGACCGCAAGAAAAGCCCTCGATCGAGTCGTAAGCAG
TCCACTACTTAAAGGGCTCGAATGTCATTTGGTGATGGTGTCTGATGATCAATCACAGGCGACCGCTGAACTAGCGTTGG
TGGCCGAGTCTCTGATGGCGGCGAATTTCAATGTGGTTACCGCCGTTTGCCAGGGAGAAGTACAAGCAGCATTAGAGGTT
TATCAAGTTACACACCAAATCGATCTTATGGTGATGGGCGCTTACGGACATTCGCGTATTCGGGAGTTTTTCGTGGGCAG
TAATACCACACGAATGATCAGTAAAAGCCATATCCCCTTGTTATTGTTGCGCTAA

Protein sequence :
MTNVIACIDGSRATLAVCDASGWAALQLDSPVILLHVLDKSAYPIESDLSGNIGLGTREHLLNEMVELEARRGKLALEQG
KYMLQDAQTRIVETQPAVVVETLQRHGDLVETLLEQESQARLVVMGRQGEQHQDQTQAIGSHLENVVRTLKQPILVVMDE
FTAPTRFMIAYDGSVTARKALDRVVSSPLLKGLECHLVMVSDDQSQATAELALVAESLMAANFNVVTAVCQGEVQAALEV
YQVTHQIDLMVMGAYGHSRIREFFVGSNTTRMISKSHIPLLLLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
uspA AFH57199.1 universal stress protein Virulence AbaR4a Protein 9e-64 47
BJAB0868_00278 YP_008211604.1 Universal stress protein UspA-related nucleotide-binding protein Not tested AbaR26 Protein 1e-63 47
uspA AFV47946.1 universal stress protein A Virulence AbaR25 Protein 9e-64 47
ABZJ_00238 YP_005524194.1 Universal stress protein Not tested AbaR22 Protein 1e-63 47
uspA AFV47966.1 universal stress protein A Virulence AbaR25 Protein 9e-64 47
ABZJ_00257 YP_005524213.1 Universal stress protein Not tested AbaR22 Protein 1e-63 47
uspA AFV47977.1 universal stress protein A Virulence delta-AbaR25 Protein 9e-64 47
ABTW07_3868 YP_005797116.1 universal stress protein Not tested AbaR4e Protein 1e-63 47
uspA AFV47994.1 universal stress protein A Virulence delta-AbaR25 Protein 9e-64 47
ABTW07_3909 YP_005797157.1 universal stress protein Not tested AbaR4e Protein 1e-63 47
ABK1_0239 YP_005512811.1 Universal stress protein Not tested AbaR4d Protein 1e-63 47
uspA AEO37451.1 universal stress protein A Not tested AbaR4 Protein 1e-63 47
BJAB07104_00258 YP_008207723.1 Universal stress protein UspA-related nucleotide-binding protein Not tested AbaR25 Protein 1e-63 47
uspA AEQ20902.1 universal stress protein A Not tested Tn6166 Protein 1e-63 47
BJAB07104_00274 YP_008207739.1 Universal stress protein UspA-related nucleotide-binding protein Not tested AbaR25 Protein 1e-63 47
uspA AEZ06029.1 universal stress protein A Not tested Tn6167 Protein 1e-63 47
BJAB0868_00262 YP_008211588.1 Universal stress protein UspA-related nucleotide-binding protein Not tested AbaR26 Protein 1e-63 47