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Name : Sput200_0118 (Sput200_0118) Accession : YP_006008073.1 Strain : Shewanella putrefaciens 200 Genome accession: NC_017566 Putative virulence/resistance : Unknown Product : Tex-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 137228 - 139669 bp Length : 2442 bp Strand : + Note : KEGG: shw:Sputw3181_0109 RNA-binding S1 domain-containing protein; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; Helix-hairpin-helix DNA-binding class 1 DNA sequence : ATGAAATTGATCATGCGCCTGTGGTATCGTGGGCGCAATTACGACTCATCCGTTAAACACGATATTTTATTTATGCAAAC GACTTCCCAAACCATTGCACATAACATCGCTCAAATCATTGCCCAAGAACTGAATGTTCGTGAGCAGCAAGTTACCGCGA CCATAGCATTGCTCGACGATGGGGCTACCGTTCCTTTTGTGGCGCGCTACCGTAAAGAAGCTACCGGTGGCTTAGACGAT ACCCAATTACGTACCCTACATAGTCGTTTAGCCTATCTTCGAGAGTTGAACGATAGACGCCAAGTGATTTTGTCCAGTAT TCAGGCTCAAGGTAAATTAACCGCAGAGCTGCAATTTGCTATTGATAGTGCCGACAGTAAGACTCGCCTCGAAGATCTCT ATTTACCCTTCAAACCTAAGCGCCGTACTAAAGGGCAAATCGCCATTGAAGCGGGTCTTGAACCATTAGCCGATGCACTG CTTGCGGATCGCAATGCCGATACCGAAGCGCTGGCTGCGGATTATATCAATGAAAATGCTGGTTTTGCCGATACTAAAGC CGTGCTCGAAGGTGCTCGTTATATTTTGATGGAACGCTACGCCGAAGATGCTGAACTCTTGCGCAAAGTGCGTGAGCATT TAAGTCAAAACAGCGTATTAGAAAGCCGTGTGATCGCGGGTAAAGAAAAGGAGGGCGCTAAGTTCCGTGACTATTTCGAA CACAATGAGTTGTTATCTAAAGTGCCGTCACACCGCGCTCTAGCTATGTTACGTGGTCGCAATGAAGGCTTTTTATCCTT ATCAATGAATGCCGACCCTAATGCACAAGCAGGTCAAGGCAGTTACTGTGAAGTGATTATTGCAGACCATTTAGGCTTGA AACTGGGTGATAGTAGCGTTGATCAATGGTTAAAAACCGTAGTAACGGCGACATGGCGTATCAAAATTGCATTGCAAATG GAGACCGAGTTTATTTCGCAAATGCGTGAACGTGCTGAAGCCGAAGCCATTAAGGTCTTTGCCCGTAACTTGGGCGATTT GCTGATGGCGGCCCCCGCTGGTGCAAAAAACACCATGGGACTCGATCCTGGTTTACGCACTGGTGTTAAAGTGGCCGTGG TGGATAACACAGGTAAGCTCCTTAGCCATGCGACAATTTTCCCCCATGCACCGCAAAATTTATGGGAAAAATCGATTCGT ACTTTAGCCAACCTTGTGAATATGCATAAGGTTGAACTGATCGCAATTGGTAACGGTACCGCCTCCCGCGAAACTGACAA ACTTGCTGCCGAATTAATTGCTAGTATAAAAGATACCCATCCACATCTCACCAAGGTCATGGTGAGCGAAGCGGGTGCCT CGGTTTATTCGGCATCGGAGTTGGCCGCACTCGAATTTCCGGAACTCGATGTCTCTATTCGCGGTGCAGTTTCTATCGCC CGCCGTCTGCAAGATCCTCTGGCTGAGTTAGTGAAAATTGAGCCTAAGTCTATCGGAGTCGGTCAATATCAGCACGATGT CAGTCAAAGCCAATTATCTAGCTCGCTTGAAGCCGTAGTCGAAGACTGTGTAAACGGTGTGGGTGTTGATTTGAATATGG CCTCAGTGCCGTTATTGTCGCAAGTGGCTGGTTTAAATAAGACCTTAGCGAAAAATGTGGTCGATTACCGCGATGCCAAT GGTCAGTTTAAAAACCGTAAAGAGCTACTTAAAGTGCCTCGTTTAGGGCCAAAGGCTTATGAGCAAGCGGCGGGTTTTTT ACGTATTCGTGAAGGAGATAATCCGCTCGATATGTCTGCCGTGCATCCTGAAGCTTATTCGCTGGTGGAAACCATAGCCA AAGCTAAACAGGTTGAATTAGCGACTCTTATTGGTAACTCAGAACTGTTACGAACGATTAATGCACAGGAGTTTATCACG CTGGAATTTGGTCTCCCTACCGTGACCGATATTTTAGCCGAGCTGGATAAACCGGGACGCGATCCCCGCGGTGAGTTTAA AACCGCTAAGTTTAAAGAGGGGATTGAAGAACTTAAGCATCTCAAACCCGAAATGATCCTCGAAGGTGTAGTGACGAACG TGACTAACTTTGGTGCCTTTGTCGATATCGGTGTGCATCAAGACGGTTTAGTCCATATTTCTTCATTGACCGACAAATTT ATCAGCGATCCCCACACAGTGGTGAAAGCGGGTGATGTGGTGAAGGTTAAAGTGATGGAAGTGGACGTTGAGCGCCGCCG TATTGGTTTGAGTATGCGTTTGGACGAGGCGATTGAACAAAACAATGCTCAGGTTAAGCATTCATCGCAAACCAAAGCCA ATCACAAATTGACTTCGTCAGGTAAAACCGCTCGCCCAGCTCAAAAGCCCGCGCCGAAAGCGCCCGCGAATGCGGCTATG GGTAACGCTTTTGCCGATGCTTTCGCTAAACTGAAAAAGTAA Protein sequence : MKLIMRLWYRGRNYDSSVKHDILFMQTTSQTIAHNIAQIIAQELNVREQQVTATIALLDDGATVPFVARYRKEATGGLDD TQLRTLHSRLAYLRELNDRRQVILSSIQAQGKLTAELQFAIDSADSKTRLEDLYLPFKPKRRTKGQIAIEAGLEPLADAL LADRNADTEALAADYINENAGFADTKAVLEGARYILMERYAEDAELLRKVREHLSQNSVLESRVIAGKEKEGAKFRDYFE HNELLSKVPSHRALAMLRGRNEGFLSLSMNADPNAQAGQGSYCEVIIADHLGLKLGDSSVDQWLKTVVTATWRIKIALQM ETEFISQMRERAEAEAIKVFARNLGDLLMAAPAGAKNTMGLDPGLRTGVKVAVVDNTGKLLSHATIFPHAPQNLWEKSIR TLANLVNMHKVELIAIGNGTASRETDKLAAELIASIKDTHPHLTKVMVSEAGASVYSASELAALEFPELDVSIRGAVSIA RRLQDPLAELVKIEPKSIGVGQYQHDVSQSQLSSSLEAVVEDCVNGVGVDLNMASVPLLSQVAGLNKTLAKNVVDYRDAN GQFKNRKELLKVPRLGPKAYEQAAGFLRIREGDNPLDMSAVHPEAYSLVETIAKAKQVELATLIGNSELLRTINAQEFIT LEFGLPTVTDILAELDKPGRDPRGEFKTAKFKEGIEELKHLKPEMILEGVVTNVTNFGAFVDIGVHQDGLVHISSLTDKF ISDPHTVVKAGDVVKVKVMEVDVERRRIGLSMRLDEAIEQNNAQVKHSSQTKANHKLTSSGKTARPAQKPAPKAPANAAM GNAFADAFAKLKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 0.0 | 60 |
