Gene Information

Name : Y11_p0891 (Y11_p0891)
Accession : YP_006007937.1
Strain :
Genome accession: NC_017565
Putative virulence/resistance : Virulence
Product : type III secretion host injection protein (YopB)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 61253 - 62326 bp
Length : 1074 bp
Strand : +
Note : -

DNA sequence : 
GTGAGTTCTCAGGGCGTGCAGCTCCCTGCACCACTAGCAGTGGTTGCCAGCCAAGTCACTGAAGGACAACAGCAAGAAAT
CACTAAATTATTGGAGTCGGTCACCCGCGGCACGGCAGGATCTCAACTGATATCAAATTATGTTTCAGTGCTAACGAATT
TTACGCTCGCTTCACCTGATACATTTGAGATTGAGTTAGGTAAGCTAGTTTCTAATTTAGAAGAAGTACGCAAAGACATA
AAAATCGCTGATATTCAGCGTCTTCATGAACAAAACATGAAGAAAATTGAAGAGAATCAAGAGAAAATCAAAGAAACAGA
AGAGAATGCCAAGCAAGTCAAGAAATCCGGCATGGCATCAAAGATTTTTGGCTGGCTCAGCGCCATAGCCTCAGTGGTTA
TCGGTGCCATCATGATGGCCTCAGGGGTAGGAGCCGTTGCCGGTGCAATGATGATTGCCTCAGGCGTAATTGGGATGGCG
AATATGGCTGTGAAACAAGCGGCGGAAGATGGCCTGATATCCCAAGAGGCAATGCAAGTATTAGGGCCGATACTCACTGC
GATTGAAGTCGCATTGACTGTAGTTTCAACCGTAATGACCTTTGGTGGTTCGGCACTAAAATGCCTGGCTGATATTGGCG
CAAAACTCGGTGCTAACACCGCAAGTCTTGCTGCTAAAGGAGCCGAGTTTTCGGCCAAAGTTGCCCAAATTTCGACAGGC
ATATCAAACACTGTCGGAAGTGCAGTGACTAAATTAGGGGGCAGTTTTGGTAGTTTAACAATGAGCCATGTAATCCGTAC
AGGATCACAGGCAACACAAGTCGCCGTTGGTGTGGGCAGCGGAATAACTCAGACCATCAATAATAAAAAACAAGCTGATT
TACAACATAATAACGCTGATTTGGCCTTGAACAAGGCAGACATGGCAGCGTTACAAAGTATTATTGACCGACTCAAAGAA
GAGTTATCCCATTTGTCAGAGTCACATCAACAAGTGATGGAACTGATTTTCCAGATGATTAATGCAAAAGGTGACATGCT
GCATAATTTGGCCGGCAGACCCCATACTGTTTAA

Protein sequence : 
MSSQGVQLPAPLAVVASQVTEGQQQEITKLLESVTRGTAGSQLISNYVSVLTNFTLASPDTFEIELGKLVSNLEEVRKDI
KIADIQRLHEQNMKKIEENQEKIKETEENAKQVKKSGMASKIFGWLSAIASVVIGAIMMASGVGAVAGAMMIASGVIGMA
NMAVKQAAEDGLISQEAMQVLGPILTAIEVALTVVSTVMTFGGSALKCLADIGAKLGANTASLAAKGAEFSAKVAQISTG
ISNTVGSAVTKLGGSFGSLTMSHVIRTGSQATQVAVGVGSGITQTINNKKQADLQHNNADLALNKADMAALQSIIDRLKE
ELSHLSESHQQVMELIFQMINAKGDMLHNLAGRPHTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lopB AAO18055.1 LopB Virulence TTSS locus Protein 2e-42 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Y11_p0891 YP_006007937.1 type III secretion host injection protein (YopB) VFG0379 Protein 7e-136 96
Y11_p0891 YP_006007937.1 type III secretion host injection protein (YopB) VFG0203 Protein 2e-47 43